DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SPTNSVPTP
Uniprot ID:
Q9H330
Source protein:
Transmembrane protein 245
Source gene:
TMEM245
Class:
DEG_COP1_1
Location:
846:854
E3 ligase:
COP1
DEGRON score:
0.8432
ASA_SCORE:
93.2889
COIL:
0.9579
CONS_SCORE:
0.2864
DSS_SCORE:
0.3816
HELIX:
0.0284
FCONS_SCORE:
0.6591
RIG_SCORE:
0.6829
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y840F
DO228617
LICA
ICGC
SPTNSVPTP
DEG_COP1_1
0.1667
p.L844I
DO229022
LICA
ICGC
SPTNSVPTP
DEG_COP1_1
0.2778
p.A842D
DO229009
LICA
ICGC
SPTNSVPTP
DEG_COP1_1
0.2222
p.A836T
DO229130
NKTL
ICGC
SPTNSVPTP
DEG_COP1_1
0.0556
p.T853M
SIDM00789
Colorectal Carcinoma
GDSC
SPTNSVPTP
DEG_COP1_1
0.7423
p.T853M
HCT-15
large_intestine
COSMIC
SPTNSVPTP
DEG_COP1_1
0.7423
p.S841N
SIDM00145
T-Lymphoblastic Leukemia
GDSC
SPTNSVPTP
DEG_COP1_1
0.1944
p.S841N
ACH-001127
Leukemia
CCLE
SPTNSVPTP
DEG_COP1_1
0.1944
p.S841N
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
SPTNSVPTP
DEG_COP1_1
0.1944
p.P860H
ACH-001061
Colon/Colorectal Cancer
CCLE
SPTNSVPTP
DEG_COP1_1
0.1667
Drug responses associated with TMEM245 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SPTNSVPTP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H330
Transmembrane protein 245
DEG_COP1_1
846:854
SPTNSVPTP
COP1
0.8432
More...