DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRARLTVVM
Uniprot ID:
Q2VWP7
Source protein:
Protogenin
Source gene:
PRTG
Class:
DEG_APCC_DBOX_1
Location:
406:414
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5106
ASA_SCORE:
52.1
COIL:
0.1271
CONS_SCORE:
0.6544
DSS_SCORE:
0.3317
HELIX:
0.0063
FCONS_SCORE:
1.009
RIG_SCORE:
0.7892
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A408T
TCGA-55-8094
LUAD
TCGA
SRARLTVVM
DEG_APCC_DBOX_1
0.6028
p.A408T
DO24150
LUAD
ICGC
SRARLTVVM
DEG_APCC_DBOX_1
0.6028
p.A408T
ACH-001395
Breast Cancer
CCLE
SRARLTVVM
DEG_APCC_DBOX_1
0.6028
p.R407K
TCGA-63-A5MS
LUSC
TCGA
SRARLTVVM
DEG_APCC_DBOX_1
0.7237
p.R407K
DO219161
LUSC
ICGC
SRARLTVVM
DEG_APCC_DBOX_1
0.7237
p.A397S
TCGA-AN-A0AJ
BRCA
TCGA
SRARLTVVM
DEG_APCC_DBOX_1
0.0833
p.A397S
DO6040
BRCA
ICGC
SRARLTVVM
DEG_APCC_DBOX_1
0.0833
p.S415P
TCGA-EY-A1GD
UCEC
TCGA
SRARLTVVM
DEG_APCC_DBOX_1
0.3056
p.S415P
DO42129
UCEC
ICGC
SRARLTVVM
DEG_APCC_DBOX_1
0.3056
p.I404V
TCGA-UF-A71D
HNSC
TCGA
SRARLTVVM
DEG_APCC_DBOX_1
0.2778
p.I404V
DO52109
HNSC
ICGC
SRARLTVVM
DEG_APCC_DBOX_1
0.2778
p.A397T
TCGA-W3-A828
SKCM
TCGA
SRARLTVVM
DEG_APCC_DBOX_1
0.0833
p.A397T
DO51273
SKCM
ICGC
SRARLTVVM
DEG_APCC_DBOX_1
0.0833
Drug responses associated with PRTG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRARLTVVM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q2VWP7
Protogenin
DEG_APCC_DBOX_1
406:414
SRARLTVVM
APC,CDC20,FZR1
0.5106
More...