DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SREALVRVL
Uniprot ID:
Q9NRJ7
Source protein:
Protocadherin beta-16
Source gene:
PCDHB16
Class:
DEG_APCC_DBOX_1
Location:
542:550
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5333
ASA_SCORE:
48.4222
COIL:
0.1878
CONS_SCORE:
0.5085
DSS_SCORE:
0.1578
HELIX:
0.0066
FCONS_SCORE:
0.8634
RIG_SCORE:
0.8746
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V549L
TCGA-28-1753
GBM
TCGA
SREALVRVL
DEG_APCC_DBOX_1
0.5654
p.V549L
DO11687
GBM
ICGC
SREALVRVL
DEG_APCC_DBOX_1
0.5654
p.R536H
TCGA-2F-A9KP
BLCA
TCGA
SREALVRVL
DEG_APCC_DBOX_1
0.1667
p.R536H
DO51860
BLCA
ICGC
SREALVRVL
DEG_APCC_DBOX_1
0.1667
p.L552M
TCGA-2W-A8YY
CESC
TCGA
SREALVRVL
DEG_APCC_DBOX_1
0.2778
p.L552M
DO223732
CESC
ICGC
SREALVRVL
DEG_APCC_DBOX_1
0.2778
p.P539T
TCGA-44-3918
LUAD
TCGA
SREALVRVL
DEG_APCC_DBOX_1
0.25
p.P539T
DO23732
LUAD
ICGC
SREALVRVL
DEG_APCC_DBOX_1
0.25
p.S538F
TCGA-BA-A6DJ
HNSC
TCGA
SREALVRVL
DEG_APCC_DBOX_1
0.2222
p.S538F
DO52034
HNSC
ICGC
SREALVRVL
DEG_APCC_DBOX_1
0.2222
p.L546P
TCGA-BG-A222
UCEC
TCGA
SREALVRVL
DEG_APCC_DBOX_1
0.7582
p.L546P
DO42977
UCEC
ICGC
SREALVRVL
DEG_APCC_DBOX_1
0.7582
p.E544K
TCGA-F5-6811
READ
TCGA
SREALVRVL
DEG_APCC_DBOX_1
0.591
p.E544K
TCGA-FS-A1ZW
SKCM
TCGA
SREALVRVL
DEG_APCC_DBOX_1
0.591
p.E544K
TCGA-MY-A913
CESC
TCGA
SREALVRVL
DEG_APCC_DBOX_1
0.591
p.E544K
DO49980
CESC
ICGC
SREALVRVL
DEG_APCC_DBOX_1
0.591
p.E544K
DO37082
READ
ICGC
SREALVRVL
DEG_APCC_DBOX_1
0.591
p.E544K
DO37519
SKCM
ICGC
SREALVRVL
DEG_APCC_DBOX_1
0.591
p.D556Y
TCGA-OR-A5KB
ACC
TCGA
SREALVRVL
DEG_APCC_DBOX_1
0.1667
p.A554T
DO227950
BRCA
ICGC
SREALVRVL
DEG_APCC_DBOX_1
0.2222
p.S543R
DO50999
LAML
ICGC
SREALVRVL
DEG_APCC_DBOX_1
0.7427
p.S543R
DO23496
LINC
ICGC
SREALVRVL
DEG_APCC_DBOX_1
0.7427
p.S543R
DO23466
LINC
ICGC
SREALVRVL
DEG_APCC_DBOX_1
0.7427
p.S532G
DO231154
LAML
ICGC
SREALVRVL
DEG_APCC_DBOX_1
0.0556
p.G537S
ACH-000793
Gastric Cancer
CCLE
SREALVRVL
DEG_APCC_DBOX_1
0.1944
p.G537S
KATOIII
stomach
COSMIC
SREALVRVL
DEG_APCC_DBOX_1
0.1944
p.D535Y
ACH-000931
Skin Cancer
CCLE
SREALVRVL
DEG_APCC_DBOX_1
0.1389
Drug responses associated with PCDHB16 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SREALVRVL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NRJ7
Protocadherin beta-16
DEG_APCC_DBOX_1
542:550
SREALVRVL
APC,CDC20,FZR1
0.5333
More...