DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRENLTDLV
Uniprot ID:
Q14676
Source protein:
Mediator of DNA damage checkpoint protein 1
Source gene:
MDC1
Class:
DEG_APCC_DBOX_1
Location:
641:649
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8155
ASA_SCORE:
95.4
COIL:
0.7463
CONS_SCORE:
0.2913
DSS_SCORE:
0.5617
HELIX:
0.1679
FCONS_SCORE:
0.8827
RIG_SCORE:
0.7686
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L645I
TCGA-CD-A4MG
STAD
TCGA
SRENLTDLV
DEG_APCC_DBOX_1
0.7174
p.L645I
DO48009
STAD
ICGC
SRENLTDLV
DEG_APCC_DBOX_1
0.7174
p.P639L
TCGA-WS-AB45
COAD
TCGA
SRENLTDLV
DEG_APCC_DBOX_1
0.2778
p.P639L
DO51734
COAD
ICGC
SRENLTDLV
DEG_APCC_DBOX_1
0.2778
p.P639L
DO233634
GACA
ICGC
SRENLTDLV
DEG_APCC_DBOX_1
0.2778
p.E643Q
DO233777
GACA
ICGC
SRENLTDLV
DEG_APCC_DBOX_1
0.5633
p.L655I
DO233942
GACA
ICGC
SRENLTDLV
DEG_APCC_DBOX_1
0.1667
p.A632S
DO50718
ORCA
ICGC
SRENLTDLV
DEG_APCC_DBOX_1
0.0833
p.L648M
SIDM00255
Neuroblastoma
GDSC
SRENLTDLV
DEG_APCC_DBOX_1
0.5999
p.L648M
ACH-002282
Neuroblastoma
CCLE
SRENLTDLV
DEG_APCC_DBOX_1
0.5999
p.L648M
NB17
autonomic_ganglia
COSMIC
SRENLTDLV
DEG_APCC_DBOX_1
0.5999
p.N644H
SIDM01588
Endometrial Carcinoma
GDSC
SRENLTDLV
DEG_APCC_DBOX_1
0.6312
p.N644H
ACH-000993
Endometrial/Uterine Cancer
CCLE
SRENLTDLV
DEG_APCC_DBOX_1
0.6312
Drug responses associated with MDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRENLTDLV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_APCC_DBOX_1
641:649
SRENLTDLV
APC,CDC20,FZR1
0.8155
More...