DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SREPLGGLS
Uniprot ID:
Q6ZMY3
Source protein:
SPOC domain-containing protein 1
Source gene:
SPOCD1
Class:
DEG_APCC_DBOX_1
Location:
390:398
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.965
ASA_SCORE:
80.2222
COIL:
0.8514
CONS_SCORE:
0.4078
DSS_SCORE:
0.5611
HELIX:
0.0944
FCONS_SCORE:
1.0012
RIG_SCORE:
0.6127
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A388V
TCGA-CK-4951
COAD
TCGA
SREPLGGLS
DEG_APCC_DBOX_1
0.2778
p.A388V
DO10582
COAD
ICGC
SREPLGGLS
DEG_APCC_DBOX_1
0.2778
p.S399F
TCGA-EE-A3JD
SKCM
TCGA
SREPLGGLS
DEG_APCC_DBOX_1
0.3056
p.S399F
DO50299
SKCM
ICGC
SREPLGGLS
DEG_APCC_DBOX_1
0.3056
p.A384T
TCGA-IB-7651
PAAD
TCGA
SREPLGGLS
DEG_APCC_DBOX_1
0.1667
p.A384T
DO46657
PAAD
ICGC
SREPLGGLS
DEG_APCC_DBOX_1
0.1667
p.A384T
SIDM00170
Head and Neck Carcinoma
GDSC
SREPLGGLS
DEG_APCC_DBOX_1
0.1667
p.A384T
ACH-000682
Head and Neck Cancer
CCLE
SREPLGGLS
DEG_APCC_DBOX_1
0.1667
p.S399C
DO225234
BRCA
ICGC
SREPLGGLS
DEG_APCC_DBOX_1
0.3056
p.D402Y
DO225261
BRCA
ICGC
SREPLGGLS
DEG_APCC_DBOX_1
0.2222
p.S390F
DO52496
COCA
ICGC
SREPLGGLS
DEG_APCC_DBOX_1
0.6871
p.G396S
DO233693
GACA
ICGC
SREPLGGLS
DEG_APCC_DBOX_1
0.5882
p.T403A
DO48743
LIRI
ICGC
SREPLGGLS
DEG_APCC_DBOX_1
0.1944
p.L390M
DO229256
LMS
ICGC
SREPLGGLS
DEG_APCC_DBOX_1
0.711
p.G381R
DO46657
PAAD
ICGC
SREPLGGLS
DEG_APCC_DBOX_1
0.0833
p.P393H
DO229272
THCA
ICGC
SREPLGGLS
DEG_APCC_DBOX_1
0.6583
p.S383N
DO219773
UCEC
ICGC
SREPLGGLS
DEG_APCC_DBOX_1
0.1389
p.R395C
DO52399
UCEC
ICGC
SREPLGGLS
DEG_APCC_DBOX_1
0.8301
p.W406R
DO41139
UCEC
ICGC
SREPLGGLS
DEG_APCC_DBOX_1
0.1111
p.S389R
SIDM00789
Colorectal Carcinoma
GDSC
SREPLGGLS
DEG_APCC_DBOX_1
0.3056
p.S389R
ACH-000997
Colon/Colorectal Cancer
CCLE
SREPLGGLS
DEG_APCC_DBOX_1
0.3056
p.S389R
ACH-001061
Colon/Colorectal Cancer
CCLE
SREPLGGLS
DEG_APCC_DBOX_1
0.3056
p.S389R
HCT-15
large_intestine
COSMIC
SREPLGGLS
DEG_APCC_DBOX_1
0.3056
p.R391H
SNU-1040
large_intestine
COSMIC
SREPLGGLS
DEG_APCC_DBOX_1
0.8244
p.V397L
CHP-126
autonomic_ganglia
COSMIC
SREPLGGLS
DEG_APCC_DBOX_1
0.6765
Drug responses associated with SPOCD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SREPLGGLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ZMY3
SPOC domain-containing protein 1
DEG_APCC_DBOX_1
390:398
SREPLGGLS
APC,CDC20,FZR1
0.965
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