DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRFALLQVD
Uniprot ID:
Q5VSY0
Source protein:
G kinase-anchoring protein 1
Source gene:
GKAP1
Class:
DEG_APCC_DBOX_1
Location:
14:22
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9352
ASA_SCORE:
41.2111
COIL:
0.4602
CONS_SCORE:
0.6547
DSS_SCORE:
0.4759
HELIX:
0.0446
FCONS_SCORE:
1.4787
RIG_SCORE:
0.7722
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S14F
TCGA-63-5128
LUSC
TCGA
SRFALLQVD
DEG_APCC_DBOX_1
0.6871
p.S14F
DO27255
LUSC
ICGC
SRFALLQVD
DEG_APCC_DBOX_1
0.6871
p.A13T
DO230347
COCA
ICGC
SRFALLQVD
DEG_APCC_DBOX_1
0.3056
p.T11N
DO229031
LICA
ICGC
SRFALLQVD
DEG_APCC_DBOX_1
0.25
p.L18M
SIDM00683
Prostate Carcinoma
GDSC
SRFALLQVD
DEG_APCC_DBOX_1
0.711
p.L18M
ACH-000977
lymph_node
CCLE
SRFALLQVD
DEG_APCC_DBOX_1
0.711
p.L18M
LNCaP-Clone-FGC
prostate
COSMIC
SRFALLQVD
DEG_APCC_DBOX_1
0.711
p.V9L
SIDM01072
Squamous Cell Lung Carcinoma
GDSC
SRFALLQVD
DEG_APCC_DBOX_1
0.6389
p.V9I
ACH-001061
Colon/Colorectal Cancer
CCLE
SRFALLQVD
DEG_APCC_DBOX_1
0.6389
Drug responses associated with GKAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRFALLQVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VSY0
G kinase-anchoring protein 1
DEG_APCC_DBOX_1
14:22
SRFALLQVD
APC,CDC20,FZR1
0.9352
More...