DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRFYLMEVV
Uniprot ID:
Q9Y5G8
Source protein:
Protocadherin gamma-A5
Source gene:
PCDHGA5
Class:
DEG_APCC_DBOX_1
Location:
312:320
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8206
ASA_SCORE:
55.3889
COIL:
0.2346
CONS_SCORE:
0.5066
DSS_SCORE:
0.1302
HELIX:
0.0092
FCONS_SCORE:
0.7807
RIG_SCORE:
0.9136
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S306L
TCGA-17-Z010
LUAD
TCGA
SRFYLMEVV
DEG_APCC_DBOX_1
0.1667
p.V328F
TCGA-50-5931
LUAD
TCGA
SRFYLMEVV
DEG_APCC_DBOX_1
0.1111
p.V328F
DO228976
LICA
ICGC
SRFYLMEVV
DEG_APCC_DBOX_1
0.1111
p.V328F
DO24980
LUAD
ICGC
SRFYLMEVV
DEG_APCC_DBOX_1
0.1111
p.M317I
TCGA-66-2727
LUSC
TCGA
SRFYLMEVV
DEG_APCC_DBOX_1
0.6507
p.M317I
TCGA-D1-A103
UCEC
TCGA
SRFYLMEVV
DEG_APCC_DBOX_1
0.6507
p.M317I
DO26478
LUSC
ICGC
SRFYLMEVV
DEG_APCC_DBOX_1
0.6507
p.M317I
DO42312
UCEC
ICGC
SRFYLMEVV
DEG_APCC_DBOX_1
0.6507
p.R313I
TCGA-AX-A2HC
UCEC
TCGA
SRFYLMEVV
DEG_APCC_DBOX_1
0.8102
p.R313I
DO41572
UCEC
ICGC
SRFYLMEVV
DEG_APCC_DBOX_1
0.8102
p.A326T
TCGA-EA-A410
CESC
TCGA
SRFYLMEVV
DEG_APCC_DBOX_1
0.1667
p.A326T
DO49929
CESC
ICGC
SRFYLMEVV
DEG_APCC_DBOX_1
0.1667
p.G325S
DO229081
PRAD
ICGC
SRFYLMEVV
DEG_APCC_DBOX_1
0.1944
p.Q322R
SIDM00960
Colorectal Carcinoma
GDSC
SRFYLMEVV
DEG_APCC_DBOX_1
0.2778
p.Q322R
ACH-000798
Colon/Colorectal Cancer
CCLE
SRFYLMEVV
DEG_APCC_DBOX_1
0.2778
p.Q322R
CL-40
large_intestine
COSMIC
SRFYLMEVV
DEG_APCC_DBOX_1
0.2778
p.Y315C
SIDM00505
Pancreatic Carcinoma
GDSC
SRFYLMEVV
DEG_APCC_DBOX_1
0.5976
Drug responses associated with PCDHGA5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRFYLMEVV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y5G8
Protocadherin gamma-A5
DEG_APCC_DBOX_1
312:320
SRFYLMEVV
APC,CDC20,FZR1
0.8206
More...