DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRGELGPVG
Uniprot ID:
P20849
Source protein:
Collagen alpha-1
Source gene:
COL9A1
Class:
DEG_APCC_DBOX_1
Location:
626:634
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9881
ASA_SCORE:
76.3222
COIL:
0.9413
CONS_SCORE:
0.705
DSS_SCORE:
0.7771
HELIX:
0.0186
FCONS_SCORE:
1.0387
RIG_SCORE:
0.5613
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E629V
TCGA-CR-7364
HNSC
TCGA
SRGELGPVG
DEG_APCC_DBOX_1
0.6582
p.R618Q
TCGA-EY-A1GD
UCEC
TCGA
SRGELGPVG
DEG_APCC_DBOX_1
0.1111
p.R618Q
ACH-001568
Skin Cancer
CCLE
SRGELGPVG
DEG_APCC_DBOX_1
0.1111
p.P624S
TCGA-FS-A4F5
SKCM
TCGA
SRGELGPVG
DEG_APCC_DBOX_1
0.2778
p.P624S
TCGA-FW-A3R5
SKCM
TCGA
SRGELGPVG
DEG_APCC_DBOX_1
0.2778
p.L623R
TCGA-RD-A7BT
STAD
TCGA
SRGELGPVG
DEG_APCC_DBOX_1
0.25
p.S635T
TCGA-T3-A92M
HNSC
TCGA
SRGELGPVG
DEG_APCC_DBOX_1
0.3056
p.G629D
DO7801
COAD
ICGC
SRGELGPVG
DEG_APCC_DBOX_1
0.7198
p.D619A
DO24665
LUAD
ICGC
SRGELGPVG
DEG_APCC_DBOX_1
0.1389
p.P636L
DO220875
MELA
ICGC
SRGELGPVG
DEG_APCC_DBOX_1
0.2778
p.G641E
DO222775
MELA
ICGC
SRGELGPVG
DEG_APCC_DBOX_1
0.25
p.G641E
DO47665
SKCM
ICGC
SRGELGPVG
DEG_APCC_DBOX_1
0.25
p.G638E
DO222708
MELA
ICGC
SRGELGPVG
DEG_APCC_DBOX_1
0.2222
p.P643S
DO50298
SKCM
ICGC
SRGELGPVG
DEG_APCC_DBOX_1
0.0833
p.P643S
DO38099
SKCM
ICGC
SRGELGPVG
DEG_APCC_DBOX_1
0.0833
p.G644V
DO42793
UCEC
ICGC
SRGELGPVG
DEG_APCC_DBOX_1
0.0556
p.S635F
SIDM00562
Breast Carcinoma
GDSC
SRGELGPVG
DEG_APCC_DBOX_1
0.3056
p.S635F
ACH-002163
Breast Cancer
CCLE
SRGELGPVG
DEG_APCC_DBOX_1
0.3056
p.S635F
MRK-nu-1
breast
COSMIC
SRGELGPVG
DEG_APCC_DBOX_1
0.3056
p.G619R
ACH-001568
Skin Cancer
CCLE
SRGELGPVG
DEG_APCC_DBOX_1
0.1389
p.G632S
RS4-11
haematopoietic_and_lymphoid_tissue
COSMIC
SRGELGPVG
DEG_APCC_DBOX_1
0.6993
Drug responses associated with COL9A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRGELGPVG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P20849
Collagen alpha-1
DEG_APCC_DBOX_1
626:634
SRGELGPVG
APC,CDC20,FZR1
0.9881
More...