DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRGGLPSLA
Uniprot ID:
O15018
Source protein:
PDZ domain-containing protein 2
Source gene:
PDZD2
Class:
DEG_APCC_DBOX_1
Location:
2264:2272
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9578
ASA_SCORE:
76.5
COIL:
0.8486
CONS_SCORE:
0.3118
DSS_SCORE:
0.488
HELIX:
0.0644
FCONS_SCORE:
1.0277
RIG_SCORE:
0.6499
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P2269L
TCGA-EB-A553
SKCM
TCGA
SRGGLPSLA
DEG_APCC_DBOX_1
0.6471
p.P2269L
DO47329
SKCM
ICGC
SRGGLPSLA
DEG_APCC_DBOX_1
0.6471
p.A2263S
DO229029
LICA
ICGC
SRGGLPSLA
DEG_APCC_DBOX_1
0.3056
p.R2265T
DO231201
LUSC
ICGC
SRGGLPSLA
DEG_APCC_DBOX_1
0.7876
p.S2264F
SIDM01029
Esophageal Squamous Cell Carcinoma
GDSC
SRGGLPSLA
DEG_APCC_DBOX_1
0.6871
p.S2264F
ACH-000873
Esophageal Cancer
CCLE
SRGGLPSLA
DEG_APCC_DBOX_1
0.6871
p.S2264F
KYSE-270
oesophagus
COSMIC
SRGGLPSLA
DEG_APCC_DBOX_1
0.6871
Drug responses associated with PDZD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRGGLPSLA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15018
PDZ domain-containing protein 2
DEG_APCC_DBOX_1
2264:2272
SRGGLPSLA
APC,CDC20,FZR1
0.9578
More...