DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRGHLLTIP
Uniprot ID:
Q9UPN3
Source protein:
Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5
Source gene:
MACF1
Class:
DEG_APCC_DBOX_1
Location:
2132:2140
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6262
ASA_SCORE:
78.4556
COIL:
0.652
CONS_SCORE:
0.2499
DSS_SCORE:
0.4688
HELIX:
0.0253
FCONS_SCORE:
0.9555
RIG_SCORE:
0.7222
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E2136K
TCGA-BS-A0UF
UCEC
TCGA
SRGHLLTIP
DEG_APCC_DBOX_1
0.7022
p.E2130G
TCGA-DI-A1NO
UCEC
TCGA
SRGHLLTIP
DEG_APCC_DBOX_1
0.2778
p.R2134W
TCGA-MX-A5UJ
STAD
TCGA
SRGHLLTIP
DEG_APCC_DBOX_1
0.8634
p.R2134W
SIDM01313
Colorectal Carcinoma
GDSC
SRGHLLTIP
DEG_APCC_DBOX_1
0.8634
p.R2133W
DO222953
BTCA
ICGC
SRGHLLTIP
DEG_APCC_DBOX_1
0.8634
p.V2127I
DO10880
GBM
ICGC
SRGHLLTIP
DEG_APCC_DBOX_1
0.1944
p.P2141S
DO14574
HNSC
ICGC
SRGHLLTIP
DEG_APCC_DBOX_1
0.3056
p.R2134Q
SIDM00081
Melanoma
GDSC
SRGHLLTIP
DEG_APCC_DBOX_1
0.7329
p.R2134Q
SK-MEL-28
skin
COSMIC
SRGHLLTIP
DEG_APCC_DBOX_1
0.7329
p.Q2142H
SIDM01451
Pancreatic Carcinoma
GDSC
SRGHLLTIP
DEG_APCC_DBOX_1
0.2778
p.A2124T
ACH-000994
Endometrial/Uterine Cancer
CCLE
SRGHLLTIP
DEG_APCC_DBOX_1
0.1111
p.A2147S
A204
soft_tissue
COSMIC
SRGHLLTIP
DEG_APCC_DBOX_1
0.1389
p.A2147S
SK-OV-3
ovary
COSMIC
SRGHLLTIP
DEG_APCC_DBOX_1
0.1389
p.A2147V
KYSE-180
oesophagus
COSMIC
SRGHLLTIP
DEG_APCC_DBOX_1
0.1389
p.Q2140P
SNU-C5
large_intestine
COSMIC
SRGHLLTIP
DEG_APCC_DBOX_1
0.7035
Drug responses associated with MACF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRGHLLTIP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPN3
Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5
DEG_APCC_DBOX_1
2132:2140
SRGHLLTIP
APC,CDC20,FZR1
0.6262
More...