DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRGSLAAVA
Uniprot ID:
Q02218
Source protein:
2-oxoglutarate dehydrogenase complex component E1
Source gene:
OGDH
Class:
DEG_APCC_DBOX_1
Location:
100:108
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6731
ASA_SCORE:
64.8667
COIL:
0.4748
CONS_SCORE:
0.2128
DSS_SCORE:
0.2869
HELIX:
0.5071
FCONS_SCORE:
0.7839
RIG_SCORE:
0.703
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A92T
TCGA-AG-A00Y
READ
TCGA
SRGSLAAVA
DEG_APCC_DBOX_1
0.1111
p.A92T
DO36542
READ
ICGC
SRGSLAAVA
DEG_APCC_DBOX_1
0.1111
p.V114I
TCGA-B5-A3FC
UCEC
TCGA
SRGSLAAVA
DEG_APCC_DBOX_1
0.1667
p.V114I
DO41871
UCEC
ICGC
SRGSLAAVA
DEG_APCC_DBOX_1
0.1667
p.V107L
TCGA-BQ-7059
KIRP
TCGA
SRGSLAAVA
DEG_APCC_DBOX_1
0.5654
p.V107L
DO20932
KIRP
ICGC
SRGSLAAVA
DEG_APCC_DBOX_1
0.5654
p.H109Y
TCGA-D3-A8GM
SKCM
TCGA
SRGSLAAVA
DEG_APCC_DBOX_1
0.3056
p.H109Y
DO50288
SKCM
ICGC
SRGSLAAVA
DEG_APCC_DBOX_1
0.3056
p.P98S
TCGA-EE-A2MS
SKCM
TCGA
SRGSLAAVA
DEG_APCC_DBOX_1
0.2778
p.P98S
DO37567
SKCM
ICGC
SRGSLAAVA
DEG_APCC_DBOX_1
0.2778
p.A108T
TCGA-EY-A1GI
UCEC
TCGA
SRGSLAAVA
DEG_APCC_DBOX_1
0.6028
p.A108T
DO41211
UCEC
ICGC
SRGSLAAVA
DEG_APCC_DBOX_1
0.6028
p.L104V
TCGA-UF-A7JF
HNSC
TCGA
SRGSLAAVA
DEG_APCC_DBOX_1
0.6765
p.L104V
DO52116
HNSC
ICGC
SRGSLAAVA
DEG_APCC_DBOX_1
0.6765
p.Y93H
DO222643
BTCA
ICGC
SRGSLAAVA
DEG_APCC_DBOX_1
0.1389
p.G111C
DO234320
ESAD
ICGC
SRGSLAAVA
DEG_APCC_DBOX_1
0.25
p.A116G
DO233694
GACA
ICGC
SRGSLAAVA
DEG_APCC_DBOX_1
0.1111
p.S95I
DO233935
GACA
ICGC
SRGSLAAVA
DEG_APCC_DBOX_1
0.6389
p.A106V
SIDM01196
Hepatocellular Carcinoma
GDSC
SRGSLAAVA
DEG_APCC_DBOX_1
0.5825
p.A106V
ACH-000422
Liver Cancer
CCLE
SRGSLAAVA
DEG_APCC_DBOX_1
0.5825
p.A106V
SNU-475
liver
COSMIC
SRGSLAAVA
DEG_APCC_DBOX_1
0.5825
p.D98G
HT
haematopoietic_and_lymphoid_tissue
COSMIC
SRGSLAAVA
DEG_APCC_DBOX_1
0.2778
p.F117L
NCI-H1563
lung
COSMIC
SRGSLAAVA
DEG_APCC_DBOX_1
0.0833
Drug responses associated with OGDH mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRGSLAAVA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q02218
2-oxoglutarate dehydrogenase complex component E1
DEG_APCC_DBOX_1
100:108
SRGSLAAVA
APC,CDC20,FZR1
0.6731
More...