DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SRHRLVPLL
Uniprot ID:
O15270
Source protein:
Serine palmitoyltransferase 2
Source gene:
SPTLC2
Class:
DEG_APCC_DBOX_1
Location:
540:548
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7464
ASA_SCORE:
97.7889
COIL:
0.8852
CONS_SCORE:
0.2032
DSS_SCORE:
0.1742
HELIX:
0.0614
FCONS_SCORE:
0.8408
RIG_SCORE:
0.8098
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E558Q
TCGA-78-7146
LUAD
TCGA
SRHRLVPLL
DEG_APCC_DBOX_1
0.0556
p.E558Q
DO23717
LUAD
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.0556
p.R543L
TCGA-AA-3664
COAD
TCGA
SRHRLVPLL
DEG_APCC_DBOX_1
0.7316
p.R543L
TCGA-CN-6010
HNSC
TCGA
SRHRLVPLL
DEG_APCC_DBOX_1
0.7316
p.R543L
TCGA-FS-A1Z0
SKCM
TCGA
SRHRLVPLL
DEG_APCC_DBOX_1
0.7316
p.R543L
DO7831
COAD
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.7316
p.R543L
DO14766
HNSC
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.7316
p.R543L
DO37431
SKCM
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.7316
p.R543W
TCGA-AJ-A3EL
UCEC
TCGA
SRHRLVPLL
DEG_APCC_DBOX_1
0.7523
p.R543W
TCGA-AN-A046
BRCA
TCGA
SRHRLVPLL
DEG_APCC_DBOX_1
0.7523
p.R543W
TCGA-EO-A22U
UCEC
TCGA
SRHRLVPLL
DEG_APCC_DBOX_1
0.7523
p.R543W
TCGA-FI-A2D5
UCEC
TCGA
SRHRLVPLL
DEG_APCC_DBOX_1
0.7523
p.R543W
DO1285
BRCA
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.7523
p.R543W
DO33084
PACA
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.7523
p.R543W
DO41542
UCEC
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.7523
p.R543W
DO43755
UCEC
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.7523
p.R543W
DO41331
UCEC
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.7523
p.R543Q
TCGA-C5-A1BM
CESC
TCGA
SRHRLVPLL
DEG_APCC_DBOX_1
0.6218
p.R543Q
DO49007
CESC
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.6218
p.R543Q
DO230605
PRAD
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.6218
p.E530K
TCGA-D8-A27G
BRCA
TCGA
SRHRLVPLL
DEG_APCC_DBOX_1
0.0556
p.E530K
DO5465
BRCA
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.0556
p.G532V
TCGA-EE-A20F
SKCM
TCGA
SRHRLVPLL
DEG_APCC_DBOX_1
0.1111
p.G532V
DO37961
SKCM
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.1111
p.P546H
TCGA-EE-A2M8
SKCM
TCGA
SRHRLVPLL
DEG_APCC_DBOX_1
0.6583
p.P546H
DO38075
SKCM
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.6583
p.D549N
TCGA-GN-A266
SKCM
TCGA
SRHRLVPLL
DEG_APCC_DBOX_1
0.3056
p.D549N
DO37432
SKCM
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.3056
p.K538Q
DO218243
GACA
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.7222
p.E554K
DO228176
PBCA
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.1667
p.P551L
DO229453
SKCA
ICGC
SRHRLVPLL
DEG_APCC_DBOX_1
0.25
p.T555M
SIDM00689
B-Lymphoblastic Leukemia
GDSC
SRHRLVPLL
DEG_APCC_DBOX_1
0.5833
p.T555M
SIDM00074
Burkitt's Lymphoma
GDSC
SRHRLVPLL
DEG_APCC_DBOX_1
0.5833
p.T555M
SIDM00717
Non-Cancerous
GDSC
SRHRLVPLL
DEG_APCC_DBOX_1
0.5833
p.T555M
SIDM00473
Oral Cavity Carcinoma
GDSC
SRHRLVPLL
DEG_APCC_DBOX_1
0.5833
p.T555M
SIDM01078
Small Cell Lung Carcinoma
GDSC
SRHRLVPLL
DEG_APCC_DBOX_1
0.5833
p.T555M
SIDM00733
Small Cell Lung Carcinoma
GDSC
SRHRLVPLL
DEG_APCC_DBOX_1
0.5833
p.T555M
SIDM00047
Non-Small Cell Lung Carcinoma
GDSC
SRHRLVPLL
DEG_APCC_DBOX_1
0.5833
p.T555M
SIDM00968
Ovarian Carcinoma
GDSC
SRHRLVPLL
DEG_APCC_DBOX_1
0.5833
p.T555M
SIDM01000
Melanoma
GDSC
SRHRLVPLL
DEG_APCC_DBOX_1
0.5833
p.T555M
SIDM01085
Bladder Carcinoma
GDSC
SRHRLVPLL
DEG_APCC_DBOX_1
0.5833
p.T555M
SIDM01640
Acute Myeloid Leukemia
GDSC
SRHRLVPLL
DEG_APCC_DBOX_1
0.5833
p.T555M
SIDM01215
Ovarian Carcinoma
GDSC
SRHRLVPLL
DEG_APCC_DBOX_1
0.5833
p.E558K
SIDM01124
Non-Small Cell Lung Carcinoma
GDSC
SRHRLVPLL
DEG_APCC_DBOX_1
0.0556
p.E558K
ACH-000945
Lung Cancer
CCLE
SRHRLVPLL
DEG_APCC_DBOX_1
0.0556
p.E558K
NCI-H650
lung
COSMIC
SRHRLVPLL
DEG_APCC_DBOX_1
0.0556
Drug responses associated with SPTLC2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRHRLVPLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15270
Serine palmitoyltransferase 2
DEG_APCC_DBOX_1
540:548
SRHRLVPLL
APC,CDC20,FZR1
0.7464
More...