DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRKHLHLVD
Uniprot ID:
Q9UP65
Source protein:
Cytosolic phospholipase A2 gamma
Source gene:
PLA2G4C
Class:
DEG_APCC_DBOX_1
Location:
377:385
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8272
ASA_SCORE:
48.8556
COIL:
0.349
CONS_SCORE:
0.3763
DSS_SCORE:
0.1302
HELIX:
0.0369
FCONS_SCORE:
1.2655
RIG_SCORE:
0.8005
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R378L
DO37851
SKCM
ICGC
SRKHLHLVD
DEG_APCC_DBOX_1
0.8428
p.M385K
TCGA-NJ-A55A
LUAD
TCGA
SRKHLHLVD
DEG_APCC_DBOX_1
0.8062
p.G379V
TCGA-55-A490
LUAD
TCGA
SRKHLHLVD
DEG_APCC_DBOX_1
0.7532
p.I380N
SIDM02063
Colorectal Carcinoma
GDSC
SRKHLHLVD
DEG_APCC_DBOX_1
0.728
p.G379D
TCGA-NH-A5IV
COAD
TCGA
SRKHLHLVD
DEG_APCC_DBOX_1
0.7198
p.S377I
NB17
autonomic_ganglia
COSMIC
SRKHLHLVD
DEG_APCC_DBOX_1
0.623
p.Y375C
TCGA-AA-A010
COAD
TCGA
SRKHLHLVD
DEG_APCC_DBOX_1
0.2778
p.Y375C
SIDM00217
Colorectal Carcinoma
GDSC
SRKHLHLVD
DEG_APCC_DBOX_1
0.2778
p.Y375C
ACH-000999
Colon/Colorectal Cancer
CCLE
SRKHLHLVD
DEG_APCC_DBOX_1
0.2778
p.Y375C
SNU-1040
large_intestine
COSMIC
SRKHLHLVD
DEG_APCC_DBOX_1
0.2778
p.M375K
DO218945
LUAD
ICGC
SRKHLHLVD
DEG_APCC_DBOX_1
0.2778
p.S387I
SIDM00255
Neuroblastoma
GDSC
SRKHLHLVD
DEG_APCC_DBOX_1
0.2778
p.S387I
ACH-002282
Neuroblastoma
CCLE
SRKHLHLVD
DEG_APCC_DBOX_1
0.2778
p.S387I
NB17
autonomic_ganglia
COSMIC
SRKHLHLVD
DEG_APCC_DBOX_1
0.2778
p.R388L
TCGA-EE-A2MD
SKCM
TCGA
SRKHLHLVD
DEG_APCC_DBOX_1
0.25
p.R388Q
TCGA-W5-AA31
CHOL
TCGA
SRKHLHLVD
DEG_APCC_DBOX_1
0.25
p.A389V
DO222632
MELA
ICGC
SRKHLHLVD
DEG_APCC_DBOX_1
0.2222
p.I390V
DO48589
LIHC
ICGC
SRKHLHLVD
DEG_APCC_DBOX_1
0.1944
p.G369D
DO49095
COAD
ICGC
SRKHLHLVD
DEG_APCC_DBOX_1
0.1111
p.P393A
DO51037
LAML
ICGC
SRKHLHLVD
DEG_APCC_DBOX_1
0.1111
p.G369V
DO24596
LUAD
ICGC
SRKHLHLVD
DEG_APCC_DBOX_1
0.1111
p.H367N
DO229034
LICA
ICGC
SRKHLHLVD
DEG_APCC_DBOX_1
0.0556
Showing 1 to 22 of 22 entries
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Drug responses associated with PLA2G4C mutations
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Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of SRKHLHLVD
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UP65
Cytosolic phospholipase A2 gamma
DEG_APCC_DBOX_1
377:385
SRKHLHLVD
APC,CDC20,FZR1
0.8272
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