DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRKRLHRIE
Uniprot ID:
Q96T23
Source protein:
Remodeling and spacing factor 1
Source gene:
RSF1
Class:
DEG_APCC_DBOX_1
Location:
1296:1304
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7257
ASA_SCORE:
123.6
COIL:
0.6841
CONS_SCORE:
0.3975
DSS_SCORE:
0.6712
HELIX:
0.2676
FCONS_SCORE:
0.9844
RIG_SCORE:
0.6381
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1297C
TCGA-EE-A2M5
SKCM
TCGA
SRKRLHRIE
DEG_APCC_DBOX_1
0.8301
p.R1299W
SIDM00495
B-Cell Non-Hodgkin's Lymphoma
GDSC
SRKRLHRIE
DEG_APCC_DBOX_1
0.7523
p.R1299W
ACH-000697
Lymphoma
CCLE
SRKRLHRIE
DEG_APCC_DBOX_1
0.7523
p.R1299W
A3-KAW
haematopoietic_and_lymphoid_tissue
COSMIC
SRKRLHRIE
DEG_APCC_DBOX_1
0.7523
p.S1296F
TCGA-GN-A8LK
SKCM
TCGA
SRKRLHRIE
DEG_APCC_DBOX_1
0.6871
p.R1299Q
SIDM00238
Ovarian Carcinoma
GDSC
SRKRLHRIE
DEG_APCC_DBOX_1
0.6218
p.R1299Q
ACH-000947
Ovarian Cancer
CCLE
SRKRLHRIE
DEG_APCC_DBOX_1
0.6218
p.R1299Q
OVK-18
ovary
COSMIC
SRKRLHRIE
DEG_APCC_DBOX_1
0.6218
p.D1306H
ACH-001412
Bladder Cancer
CCLE
SRKRLHRIE
DEG_APCC_DBOX_1
0.2778
p.E1288D
TCGA-18-3411
LUSC
TCGA
SRKRLHRIE
DEG_APCC_DBOX_1
0.1111
p.D1312G
SIDM00217
Colorectal Carcinoma
GDSC
SRKRLHRIE
DEG_APCC_DBOX_1
0.1111
p.D1312G
ACH-000999
Colon/Colorectal Cancer
CCLE
SRKRLHRIE
DEG_APCC_DBOX_1
0.1111
p.D1312G
SNU-1040
large_intestine
COSMIC
SRKRLHRIE
DEG_APCC_DBOX_1
0.1111
p.E1288K
SIDM00937
Oral Cavity Carcinoma
GDSC
SRKRLHRIE
DEG_APCC_DBOX_1
0.1111
p.E1288K
ACH-000832
Head and Neck Cancer
CCLE
SRKRLHRIE
DEG_APCC_DBOX_1
0.1111
p.E1288K
CAL-27
upper_aerodigestive_tract
COSMIC
SRKRLHRIE
DEG_APCC_DBOX_1
0.1111
p.A1314T
TCGA-BR-4362
STAD
TCGA
SRKRLHRIE
DEG_APCC_DBOX_1
0.0556
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Drug responses associated with RSF1 mutations
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Cancer
Mutation (In Degron?)
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Drug
IC50
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All proteins holding degron of SRKRLHRIE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96T23
Remodeling and spacing factor 1
DEG_APCC_DBOX_1
1296:1304
SRKRLHRIE
APC,CDC20,FZR1
0.7257
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