DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRKRLHRIE
Uniprot ID:
Q96T23
Source protein:
Remodeling and spacing factor 1
Source gene:
RSF1
Class:
DEG_APCC_DBOX_1
Location:
1296:1304
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7257
ASA_SCORE:
123.6
COIL:
0.6841
CONS_SCORE:
0.3975
DSS_SCORE:
0.6712
HELIX:
0.2676
FCONS_SCORE:
0.9844
RIG_SCORE:
0.6381
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1288D
TCGA-18-3411
LUSC
TCGA
SRKRLHRIE
DEG_APCC_DBOX_1
0.1111
p.A1314T
TCGA-BR-4362
STAD
TCGA
SRKRLHRIE
DEG_APCC_DBOX_1
0.0556
p.R1297C
TCGA-EE-A2M5
SKCM
TCGA
SRKRLHRIE
DEG_APCC_DBOX_1
0.8301
p.S1296F
TCGA-GN-A8LK
SKCM
TCGA
SRKRLHRIE
DEG_APCC_DBOX_1
0.6871
p.R1299W
SIDM00495
B-Cell Non-Hodgkin's Lymphoma
GDSC
SRKRLHRIE
DEG_APCC_DBOX_1
0.7523
p.R1299W
ACH-000697
Lymphoma
CCLE
SRKRLHRIE
DEG_APCC_DBOX_1
0.7523
p.R1299W
A3-KAW
haematopoietic_and_lymphoid_tissue
COSMIC
SRKRLHRIE
DEG_APCC_DBOX_1
0.7523
p.R1299Q
SIDM00238
Ovarian Carcinoma
GDSC
SRKRLHRIE
DEG_APCC_DBOX_1
0.6218
p.R1299Q
ACH-000947
Ovarian Cancer
CCLE
SRKRLHRIE
DEG_APCC_DBOX_1
0.6218
p.R1299Q
OVK-18
ovary
COSMIC
SRKRLHRIE
DEG_APCC_DBOX_1
0.6218
p.D1312G
SIDM00217
Colorectal Carcinoma
GDSC
SRKRLHRIE
DEG_APCC_DBOX_1
0.1111
p.D1312G
ACH-000999
Colon/Colorectal Cancer
CCLE
SRKRLHRIE
DEG_APCC_DBOX_1
0.1111
p.D1312G
SNU-1040
large_intestine
COSMIC
SRKRLHRIE
DEG_APCC_DBOX_1
0.1111
p.E1288K
SIDM00937
Oral Cavity Carcinoma
GDSC
SRKRLHRIE
DEG_APCC_DBOX_1
0.1111
p.E1288K
ACH-000832
Head and Neck Cancer
CCLE
SRKRLHRIE
DEG_APCC_DBOX_1
0.1111
p.E1288K
CAL-27
upper_aerodigestive_tract
COSMIC
SRKRLHRIE
DEG_APCC_DBOX_1
0.1111
p.D1306H
ACH-001412
Bladder Cancer
CCLE
SRKRLHRIE
DEG_APCC_DBOX_1
0.2778
Drug responses associated with RSF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRKRLHRIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96T23
Remodeling and spacing factor 1
DEG_APCC_DBOX_1
1296:1304
SRKRLHRIE
APC,CDC20,FZR1
0.7257
More...