DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRKWLKSIL
Uniprot ID:
Q9ULG1
Source protein:
Chromatin-remodeling ATPase INO80
Source gene:
INO80
Class:
DEG_APCC_DBOX_1
Location:
122:130
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8947
ASA_SCORE:
67.6333
COIL:
0.2164
CONS_SCORE:
0.3358
DSS_SCORE:
0.2395
HELIX:
0.7693
FCONS_SCORE:
1.2669
RIG_SCORE:
0.7999
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S122R
DO229019
LICA
ICGC
SRKWLKSIL
DEG_APCC_DBOX_1
0.6316
p.S128N
SIDM00145
T-Lymphoblastic Leukemia
GDSC
SRKWLKSIL
DEG_APCC_DBOX_1
0.5958
p.S128N
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
SRKWLKSIL
DEG_APCC_DBOX_1
0.5958
p.S122G
TCGA-66-2769
LUSC
TCGA
SRKWLKSIL
DEG_APCC_DBOX_1
0.5882
p.S122G
DO26522
LUSC
ICGC
SRKWLKSIL
DEG_APCC_DBOX_1
0.5882
p.K124N
TCGA-A5-A0G2
UCEC
TCGA
SRKWLKSIL
DEG_APCC_DBOX_1
0.5806
p.K124N
DO41235
UCEC
ICGC
SRKWLKSIL
DEG_APCC_DBOX_1
0.5806
p.A134S
KYSE-450
oesophagus
COSMIC
SRKWLKSIL
DEG_APCC_DBOX_1
0.2222
p.A134D
SJRH30
soft_tissue
COSMIC
SRKWLKSIL
DEG_APCC_DBOX_1
0.2222
p.F116L
SIDM01611
Endometrial Carcinoma
GDSC
SRKWLKSIL
DEG_APCC_DBOX_1
0.1667
p.F116L
ACH-000996
Endometrial/Uterine Cancer
CCLE
SRKWLKSIL
DEG_APCC_DBOX_1
0.1667
p.E115D
YT
haematopoietic_and_lymphoid_tissue
COSMIC
SRKWLKSIL
DEG_APCC_DBOX_1
0.1389
p.D139Y
TCGA-HE-7130
KIRP
TCGA
SRKWLKSIL
DEG_APCC_DBOX_1
0.0833
p.D139Y
DO20776
KIRP
ICGC
SRKWLKSIL
DEG_APCC_DBOX_1
0.0833
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Drug responses associated with INO80 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of SRKWLKSIL
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9ULG1
Chromatin-remodeling ATPase INO80
DEG_APCC_DBOX_1
122:130
SRKWLKSIL
APC,CDC20,FZR1
0.8947
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