DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SRLRLHHVS
Uniprot ID:
P98160
Source protein:
Basement membrane-specific heparan sulfate proteoglycan core protein
Source gene:
HSPG2
Class:
DEG_APCC_DBOX_1
Location:
2776:2784
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8988
ASA_SCORE:
56.2
COIL:
0.4969
CONS_SCORE:
0.4038
DSS_SCORE:
0.5513
HELIX:
0.0047
FCONS_SCORE:
0.8554
RIG_SCORE:
0.6685
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G2775D
TCGA-2W-A8YY
CESC
TCGA
SRLRLHHVS
DEG_APCC_DBOX_1
0.3056
p.G2775D
DO223732
CESC
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.3056
p.G2775S
TCGA-2W-A8YY
CESC
TCGA
SRLRLHHVS
DEG_APCC_DBOX_1
0.3056
p.G2775S
DO223732
CESC
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.3056
p.R2794P
TCGA-90-A59Q
LUSC
TCGA
SRLRLHHVS
DEG_APCC_DBOX_1
0.0556
p.R2794P
DO50103
LUSC
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.0556
p.C2793F
TCGA-90-A59Q
LUSC
TCGA
SRLRLHHVS
DEG_APCC_DBOX_1
0.0833
p.C2793F
DO50103
LUSC
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.0833
p.R2794Q
TCGA-AP-A0LM
UCEC
TCGA
SRLRLHHVS
DEG_APCC_DBOX_1
0.0556
p.R2794Q
DO43306
UCEC
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.0556
p.R2794Q
SIDM01147
Gastric Carcinoma
GDSC
SRLRLHHVS
DEG_APCC_DBOX_1
0.0556
p.L2767I
TCGA-AP-A1DK
UCEC
TCGA
SRLRLHHVS
DEG_APCC_DBOX_1
0.0833
p.L2767I
DO42033
UCEC
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.0833
p.R2777L
TCGA-CN-A63W
HNSC
TCGA
SRLRLHHVS
DEG_APCC_DBOX_1
0.8428
p.R2777L
TCGA-L9-A7SV
LUAD
TCGA
SRLRLHHVS
DEG_APCC_DBOX_1
0.8428
p.R2777L
DO49031
HNSC
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.8428
p.R2777L
DO49875
LUAD
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.8428
p.R2794W
TCGA-CV-6955
HNSC
TCGA
SRLRLHHVS
DEG_APCC_DBOX_1
0.0556
p.R2794W
DO14338
HNSC
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.0556
p.Q2772H
TCGA-D3-A1Q3
SKCM
TCGA
SRLRLHHVS
DEG_APCC_DBOX_1
0.2222
p.R2779W
TCGA-ED-A66Y
LIHC
TCGA
SRLRLHHVS
DEG_APCC_DBOX_1
0.7523
p.R2779W
DO230346
COCA
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.7523
p.R2779W
DO44874
LIHC
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.7523
p.S2769G
TCGA-HU-A4H8
STAD
TCGA
SRLRLHHVS
DEG_APCC_DBOX_1
0.1389
p.S2769G
DO47869
STAD
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.1389
p.P2768S
TCGA-OD-A75X
SKCM
TCGA
SRLRLHHVS
DEG_APCC_DBOX_1
0.1111
p.P2768S
DO48601
SKCM
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.1111
p.D2787E
DO225090
BRCA
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.25
p.H2781N
DO229032
LICA
ICGC
SRLRLHHVS
DEG_APCC_DBOX_1
0.6312
p.S2788L
SIDM00615
Hepatocellular Carcinoma
GDSC
SRLRLHHVS
DEG_APCC_DBOX_1
0.2222
p.S2788L
ACH-000217
Liver Cancer
CCLE
SRLRLHHVS
DEG_APCC_DBOX_1
0.2222
p.S2788L
JHH-6
liver
COSMIC
SRLRLHHVS
DEG_APCC_DBOX_1
0.2222
p.R2774H
SIDM01007
T-Lymphoblastic Leukemia
GDSC
SRLRLHHVS
DEG_APCC_DBOX_1
0.2778
p.R2774H
ACH-002256
Leukemia
CCLE
SRLRLHHVS
DEG_APCC_DBOX_1
0.2778
p.R2774H
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
SRLRLHHVS
DEG_APCC_DBOX_1
0.2778
p.R2777Q
SIDM00746
Non-Small Cell Lung Carcinoma
GDSC
SRLRLHHVS
DEG_APCC_DBOX_1
0.7329
p.R2777Q
SIDM01336
Glioblastoma
GDSC
SRLRLHHVS
DEG_APCC_DBOX_1
0.7329
p.Y2791C
SIDM01045
Endometrial Carcinoma
GDSC
SRLRLHHVS
DEG_APCC_DBOX_1
0.1389
p.Y2791C
ACH-000978
Endometrial/Uterine Cancer
CCLE
SRLRLHHVS
DEG_APCC_DBOX_1
0.1389
p.Y2791C
EN
endometrium
COSMIC
SRLRLHHVS
DEG_APCC_DBOX_1
0.1389
p.P2785L
SIDM00254
Neuroblastoma
GDSC
SRLRLHHVS
DEG_APCC_DBOX_1
0.3056
p.V2792M
SIDM01228
Melanoma
GDSC
SRLRLHHVS
DEG_APCC_DBOX_1
0.1111
p.V2792M
CHL-1
skin
COSMIC
SRLRLHHVS
DEG_APCC_DBOX_1
0.1111
Drug responses associated with HSPG2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRLRLHHVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P98160
Basement membrane-specific heparan sulfate proteoglycan core protein
DEG_APCC_DBOX_1
2776:2784
SRLRLHHVS
APC,CDC20,FZR1
0.8988
More...