DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SRLSLMAMP
Uniprot ID:
Q9BQI7
Source protein:
PH and SEC7 domain-containing protein 2
Source gene:
PSD2
Class:
DEG_APCC_DBOX_1
Location:
236:244
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8549
ASA_SCORE:
83.8222
COIL:
0.5377
CONS_SCORE:
0.3217
DSS_SCORE:
0.5913
HELIX:
0.4152
FCONS_SCORE:
1.1274
RIG_SCORE:
0.6827
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R230C
TCGA-44-4112
LUAD
TCGA
SRLSLMAMP
DEG_APCC_DBOX_1
0.1667
p.R230C
DO26032
LUAD
ICGC
SRLSLMAMP
DEG_APCC_DBOX_1
0.1667
p.R230H
TCGA-AP-A0LM
UCEC
TCGA
SRLSLMAMP
DEG_APCC_DBOX_1
0.1667
p.R230H
TCGA-EY-A1GF
UCEC
TCGA
SRLSLMAMP
DEG_APCC_DBOX_1
0.1667
p.R230H
DO50700
ORCA
ICGC
SRLSLMAMP
DEG_APCC_DBOX_1
0.1667
p.R230H
DO43306
UCEC
ICGC
SRLSLMAMP
DEG_APCC_DBOX_1
0.1667
p.R230H
DO41704
UCEC
ICGC
SRLSLMAMP
DEG_APCC_DBOX_1
0.1667
p.G254S
TCGA-FW-A3R5
SKCM
TCGA
SRLSLMAMP
DEG_APCC_DBOX_1
0.0556
p.G254S
DO37406
SKCM
ICGC
SRLSLMAMP
DEG_APCC_DBOX_1
0.0556
p.S236I
TCGA-MH-A854
KIRP
TCGA
SRLSLMAMP
DEG_APCC_DBOX_1
0.623
p.S236I
DO49773
KIRP
ICGC
SRLSLMAMP
DEG_APCC_DBOX_1
0.623
p.R237H
TCGA-UY-A8OC
BLCA
TCGA
SRLSLMAMP
DEG_APCC_DBOX_1
0.8244
p.R237H
DO219038
BLCA
ICGC
SRLSLMAMP
DEG_APCC_DBOX_1
0.8244
p.R230L
DO228976
LICA
ICGC
SRLSLMAMP
DEG_APCC_DBOX_1
0.1667
p.G246R
DO231712
LINC
ICGC
SRLSLMAMP
DEG_APCC_DBOX_1
0.2778
p.R237C
DO222363
MELA
ICGC
SRLSLMAMP
DEG_APCC_DBOX_1
0.8301
p.R237C
SIDM01073
Other Blood Cancers
GDSC
SRLSLMAMP
DEG_APCC_DBOX_1
0.8301
p.N245S
SIDM00611
Kidney Carcinoma
GDSC
SRLSLMAMP
DEG_APCC_DBOX_1
0.3056
p.N245S
SIDM00348
Esophageal Squamous Cell Carcinoma
GDSC
SRLSLMAMP
DEG_APCC_DBOX_1
0.3056
p.N245S
SIDM01575
Plasma Cell Myeloma
GDSC
SRLSLMAMP
DEG_APCC_DBOX_1
0.3056
p.N245S
ACH-000426
Myeloma
CCLE
SRLSLMAMP
DEG_APCC_DBOX_1
0.3056
p.N245S
ACH-000488
Esophageal Cancer
CCLE
SRLSLMAMP
DEG_APCC_DBOX_1
0.3056
p.N245S
ACH-000684
Kidney Cancer
CCLE
SRLSLMAMP
DEG_APCC_DBOX_1
0.3056
p.N245S
TE-11
oesophagus
COSMIC
SRLSLMAMP
DEG_APCC_DBOX_1
0.3056
p.N245S
KMRC-1
kidney
COSMIC
SRLSLMAMP
DEG_APCC_DBOX_1
0.3056
p.H248Y
SIDM01175
Other Sarcomas
GDSC
SRLSLMAMP
DEG_APCC_DBOX_1
0.2222
p.H248Y
ACH-002309
Sarcoma
CCLE
SRLSLMAMP
DEG_APCC_DBOX_1
0.2222
p.H248Y
SW684
soft_tissue
COSMIC
SRLSLMAMP
DEG_APCC_DBOX_1
0.2222
p.M241V
SIDM01154
T-Lymphoblastic Leukemia
GDSC
SRLSLMAMP
DEG_APCC_DBOX_1
0.6097
p.M241V
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
SRLSLMAMP
DEG_APCC_DBOX_1
0.6097
p.A242T
ACH-000738
Brain Cancer
CCLE
SRLSLMAMP
DEG_APCC_DBOX_1
0.6028
p.A242T
GB-1
central_nervous_system
COSMIC
SRLSLMAMP
DEG_APCC_DBOX_1
0.6028
Drug responses associated with PSD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRLSLMAMP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BQI7
PH and SEC7 domain-containing protein 2
DEG_APCC_DBOX_1
236:244
SRLSLMAMP
APC,CDC20,FZR1
0.8549
More...