DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
SRNKLSKIP
Uniprot ID:
Q9HC35
Source protein:
Echinoderm microtubule-associated protein-like 4
Source gene:
EML4
Class:
DEG_APCC_DBOX_1
Location:
191:199
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.943
ASA_SCORE:
93.8778
COIL:
0.8148
CONS_SCORE:
0.5111
DSS_SCORE:
0.5902
HELIX:
0.1403
FCONS_SCORE:
0.9681
RIG_SCORE:
0.6467
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R192H
TCGA-09-0365
OV
TCGA
SRNKLSKIP
DEG_APCC_DBOX_1
0.8244
p.S184Y
TCGA-19-5956
GBM
TCGA
SRNKLSKIP
DEG_APCC_DBOX_1
0.5833
p.H182R
TCGA-42-2582
OV
TCGA
SRNKLSKIP
DEG_APCC_DBOX_1
0.0833
p.P199H
TCGA-AM-5821
COAD
TCGA
SRNKLSKIP
DEG_APCC_DBOX_1
0.6583
p.K207Q
TCGA-BS-A0UV
UCEC
TCGA
SRNKLSKIP
DEG_APCC_DBOX_1
0.2222
p.R192C
TCGA-CD-A4MI
STAD
TCGA
SRNKLSKIP
DEG_APCC_DBOX_1
0.8301
p.D189E
TCGA-CG-4301
STAD
TCGA
SRNKLSKIP
DEG_APCC_DBOX_1
0.2778
p.P206Q
TCGA-CV-7421
HNSC
TCGA
SRNKLSKIP
DEG_APCC_DBOX_1
0.1389
p.H182Y
TCGA-EY-A1GU
UCEC
TCGA
SRNKLSKIP
DEG_APCC_DBOX_1
0.0833
p.V208F
TCGA-F5-6814
READ
TCGA
SRNKLSKIP
DEG_APCC_DBOX_1
0.0833
p.W185C
TCGA-HE-7129
KIRP
TCGA
SRNKLSKIP
DEG_APCC_DBOX_1
0.1667
p.P183L
DO222420
MELA
ICGC
SRNKLSKIP
DEG_APCC_DBOX_1
0.1111
p.N188S
DO38599
STAD
ICGC
SRNKLSKIP
DEG_APCC_DBOX_1
0.25
p.R193I
DO41331
UCEC
ICGC
SRNKLSKIP
DEG_APCC_DBOX_1
0.8102
p.D190G
SIDM00224
Mesothelioma
GDSC
SRNKLSKIP
DEG_APCC_DBOX_1
0.3056
p.D190G
ACH-000569
Lung Cancer
CCLE
SRNKLSKIP
DEG_APCC_DBOX_1
0.3056
p.D190G
IST-MES1
pleura
COSMIC
SRNKLSKIP
DEG_APCC_DBOX_1
0.3056
p.I198V
ACH-001375
Pancreatic Cancer
CCLE
SRNKLSKIP
DEG_APCC_DBOX_1
0.5965
p.D187H
DJM-1
skin
COSMIC
SRNKLSKIP
DEG_APCC_DBOX_1
0.2222
p.D185N
L-363
haematopoietic_and_lymphoid_tissue
COSMIC
SRNKLSKIP
DEG_APCC_DBOX_1
0.1667
Drug responses associated with EML4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRNKLSKIP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HC35
Echinoderm microtubule-associated protein-like 4
DEG_APCC_DBOX_1
191:199
SRNKLSKIP
APC,CDC20,FZR1
0.943
More...