DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
SRNTLNDLL
Uniprot ID:
Q8NFY4
Source protein:
Semaphorin-6D
Source gene:
SEMA6D
Class:
DEG_APCC_DBOX_1
Location:
875:883
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9432
ASA_SCORE:
62.8222
COIL:
0.4367
CONS_SCORE:
0.3792
DSS_SCORE:
0.5787
HELIX:
0.5471
FCONS_SCORE:
1.0218
RIG_SCORE:
0.6981
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R871H
TCGA-73-4662
LUAD
TCGA
SRNTLNDLL
DEG_APCC_DBOX_1
0.2222
p.R871H
SIDM02013
Colorectal Carcinoma
GDSC
SRNTLNDLL
DEG_APCC_DBOX_1
0.2222
p.P893H
TCGA-AZ-4315
COAD
TCGA
SRNTLNDLL
DEG_APCC_DBOX_1
0.0556
p.N890T
TCGA-BS-A0UJ
UCEC
TCGA
SRNTLNDLL
DEG_APCC_DBOX_1
0.1389
p.R870W
TCGA-D1-A0ZO
UCEC
TCGA
SRNTLNDLL
DEG_APCC_DBOX_1
0.1944
p.S872Y
TCGA-D1-A17Q
UCEC
TCGA
SRNTLNDLL
DEG_APCC_DBOX_1
0.25
p.D874G
TCGA-DB-A64L
LGG
TCGA
SRNTLNDLL
DEG_APCC_DBOX_1
0.3056
p.P871L
DO816
BLCA
ICGC
SRNTLNDLL
DEG_APCC_DBOX_1
0.2222
p.R882Q
DO222817
BTCA
ICGC
SRNTLNDLL
DEG_APCC_DBOX_1
0.7329
p.R876I
DO8730
COAD
ICGC
SRNTLNDLL
DEG_APCC_DBOX_1
0.8102
p.R876I
ACH-001853
Bile Duct Cancer
CCLE
SRNTLNDLL
DEG_APCC_DBOX_1
0.8102
p.V891I
DO22295
LGG
ICGC
SRNTLNDLL
DEG_APCC_DBOX_1
0.1111
p.K881R
DO37871
SKCM
ICGC
SRNTLNDLL
DEG_APCC_DBOX_1
0.7237
p.P871S
DO37432
SKCM
ICGC
SRNTLNDLL
DEG_APCC_DBOX_1
0.2222
p.P870L
DO51286
SKCM
ICGC
SRNTLNDLL
DEG_APCC_DBOX_1
0.1944
p.S866L
DO43306
UCEC
ICGC
SRNTLNDLL
DEG_APCC_DBOX_1
0.1944
p.S866L
DO41572
UCEC
ICGC
SRNTLNDLL
DEG_APCC_DBOX_1
0.1944
p.S866L
DO41361
UCEC
ICGC
SRNTLNDLL
DEG_APCC_DBOX_1
0.1944
p.S866L
REH
haematopoietic_and_lymphoid_tissue
COSMIC
SRNTLNDLL
DEG_APCC_DBOX_1
0.1944
p.L867I
DO43041
UCEC
ICGC
SRNTLNDLL
DEG_APCC_DBOX_1
0.1111
p.S891N
SIDM00530
Esophageal Carcinoma
GDSC
SRNTLNDLL
DEG_APCC_DBOX_1
0.1111
p.S891N
ACH-001544
Esophageal Cancer
CCLE
SRNTLNDLL
DEG_APCC_DBOX_1
0.1111
p.S891N
KYAE-1
oesophagus
COSMIC
SRNTLNDLL
DEG_APCC_DBOX_1
0.1111
p.S872L
REH
haematopoietic_and_lymphoid_tissue
COSMIC
SRNTLNDLL
DEG_APCC_DBOX_1
0.25
Drug responses associated with SEMA6D mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRNTLNDLL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NFY4
Semaphorin-6D
DEG_APCC_DBOX_1
875:883
SRNTLNDLL
APC,CDC20,FZR1
0.9432
More...