DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
SRPVLHLLQ
Uniprot ID:
Q96DN2
Source protein:
von Willebrand factor C and EGF domain-containing protein
Source gene:
VWCE
Class:
DEG_APCC_DBOX_1
Location:
792:800
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6228
ASA_SCORE:
83.3667
COIL:
0.6788
CONS_SCORE:
0.4645
DSS_SCORE:
0.4432
HELIX:
0.1413
FCONS_SCORE:
0.9065
RIG_SCORE:
0.8087
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P787Q
TCGA-28-5211
GBM
TCGA
SRPVLHLLQ
DEG_APCC_DBOX_1
0.1944
p.P787T
TCGA-66-2795
LUSC
TCGA
SRPVLHLLQ
DEG_APCC_DBOX_1
0.1944
p.S782C
TCGA-AC-A23H
BRCA
TCGA
SRPVLHLLQ
DEG_APCC_DBOX_1
0.0556
p.S782C
DO2401
BRCA
ICGC
SRPVLHLLQ
DEG_APCC_DBOX_1
0.0556
p.P784S
TCGA-VS-A9UI
CESC
TCGA
SRPVLHLLQ
DEG_APCC_DBOX_1
0.1111
p.P784S
DO219734
CESC
ICGC
SRPVLHLLQ
DEG_APCC_DBOX_1
0.1111
p.T788K
SIDM00762
Non-Small Cell Lung Carcinoma
GDSC
SRPVLHLLQ
DEG_APCC_DBOX_1
0.2222
p.T788K
SIDM00857
Melanoma
GDSC
SRPVLHLLQ
DEG_APCC_DBOX_1
0.2222
p.T788K
SIDM01089
B-Cell Non-Hodgkin's Lymphoma
GDSC
SRPVLHLLQ
DEG_APCC_DBOX_1
0.2222
p.T788K
SIDM01424
B-Lymphoblastic Leukemia
GDSC
SRPVLHLLQ
DEG_APCC_DBOX_1
0.2222
p.V795M
SIDM00129
Melanoma
GDSC
SRPVLHLLQ
DEG_APCC_DBOX_1
0.6097
p.V795M
ACH-002121
Skin Cancer
CCLE
SRPVLHLLQ
DEG_APCC_DBOX_1
0.6097
p.V795M
G-MEL
skin
COSMIC
SRPVLHLLQ
DEG_APCC_DBOX_1
0.6097
p.M808I
SIDM00640
Mesothelioma
GDSC
SRPVLHLLQ
DEG_APCC_DBOX_1
0.1111
p.M808I
ACH-000335
Lung Cancer
CCLE
SRPVLHLLQ
DEG_APCC_DBOX_1
0.1111
p.M808I
MSTO-211H
pleura
COSMIC
SRPVLHLLQ
DEG_APCC_DBOX_1
0.1111
Drug responses associated with VWCE mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRPVLHLLQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96DN2
von Willebrand factor C and EGF domain-containing protein
DEG_APCC_DBOX_1
792:800
SRPVLHLLQ
APC,CDC20,FZR1
0.6228
More...