DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRRQLPPVP
Uniprot ID:
Q15878
Source protein:
Voltage-dependent R-type calcium channel subunit alpha-1E
Source gene:
CACNA1E
Class:
DEG_APCC_DBOX_1
Location:
2155:2163
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9659
ASA_SCORE:
109.4778
COIL:
0.9516
CONS_SCORE:
0.2721
DSS_SCORE:
0.7856
HELIX:
0.0307
FCONS_SCORE:
0.9514
RIG_SCORE:
0.6173
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T2149S
TCGA-14-1453
GBM
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.1667
p.S2171Y
TCGA-21-1082
LUSC
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.1111
p.S2145Y
TCGA-22-1012
LUSC
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.5
p.T2151N
TCGA-33-4583
LUSC
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.2222
p.S2150R
TCGA-39-5034
LUSC
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.1944
p.S2150T
TCGA-66-2767
LUSC
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.1944
p.R2167W
TCGA-BG-A0VT
UCEC
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.2222
p.V2162I
TCGA-CR-6493
HNSC
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.5965
p.V2162I
TCGA-HC-7080
PRAD
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.5965
p.V2162I
TCGA-ZR-A9CJ
ESCA
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.5965
p.S2171F
TCGA-D9-A1JW
SKCM
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.1111
p.S2145C
TCGA-DD-A4NQ
LIHC
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.5
p.R2167Q
TCGA-E2-A108
BRCA
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.2222
p.R2167Q
TCGA-FI-A2F4
UCEC
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.2222
p.S2173R
TCGA-E7-A4IJ
BLCA
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.0556
p.R2154K
TCGA-EE-A29L
SKCM
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.3056
p.S2145F
TCGA-EE-A3AC
SKCM
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.5
p.R2156C
TCGA-EI-6917
READ
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.8301
p.S2147C
TCGA-L6-A4EU
THCA
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.1111
p.R2157W
TCGA-NH-A5IV
COAD
TCGA
SRRQLPPVP
DEG_APCC_DBOX_1
0.7523
p.R2157W
SIDM00118
Colorectal Carcinoma
GDSC
SRRQLPPVP
DEG_APCC_DBOX_1
0.7523
p.R2157W
HCC2998
large_intestine
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.7523
p.L2161R
DO219042
BLCA
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.8428
p.E2168K
DO222973
BTCA
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.1944
p.E2168K
DO222599
MELA
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.1944
p.E2168K
DO37835
SKCM
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.1944
p.E2168K
CL-11
large_intestine
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.1944
p.R2173Q
DO10782
COAD
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.0556
p.G2145V
DO8264
COAD
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.5
p.G2156C
DO222755
COCA
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.76
p.R2164C
DO233161
GACA
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.3056
p.P2171Q
DO15198
HNSC
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.1111
p.H2172Y
DO228907
LICA
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.0833
p.R2162G
DO220866
MELA
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.7568
p.G2145E
DO220875
MELA
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.5
p.G2145E
DO37635
SKCM
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.5
p.G2145E
DO37839
SKCM
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.5
p.G2145E
ACH-000762
Head and Neck Cancer
CCLE
SRRQLPPVP
DEG_APCC_DBOX_1
0.5
p.S2167F
DO222702
MELA
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.2222
p.S2167F
BONNA-12
haematopoietic_and_lymphoid_tissue
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.2222
p.S2161F
DO229446
SKCA
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.7982
p.S2151F
DO37703
SKCM
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.2222
p.C2163R
DO47819
STAD
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.8301
p.S2151Y
DO47929
STAD
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.2222
p.Q2155R
DO222392
STAD
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.7329
p.S2167Y
DO41133
UCEC
ICGC
SRRQLPPVP
DEG_APCC_DBOX_1
0.2222
p.P2161H
SIDM00120
Prostate Carcinoma
GDSC
SRRQLPPVP
DEG_APCC_DBOX_1
0.6583
p.P2161H
DU-145
prostate
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.6583
p.R2157Q
SIDM01002
Breast Carcinoma
GDSC
SRRQLPPVP
DEG_APCC_DBOX_1
0.6218
p.R2157Q
SIDM00265
Ewing's Sarcoma
GDSC
SRRQLPPVP
DEG_APCC_DBOX_1
0.6218
p.R2157Q
SIDM00847
Rhabdomyosarcoma
GDSC
SRRQLPPVP
DEG_APCC_DBOX_1
0.6218
p.Y2172C
SIDM00846
Cervical Carcinoma
GDSC
SRRQLPPVP
DEG_APCC_DBOX_1
0.0833
p.L2170F
SIDM00737
Non-Small Cell Lung Carcinoma
GDSC
SRRQLPPVP
DEG_APCC_DBOX_1
0.1389
p.L2170F
ACH-000904
Lung Cancer
CCLE
SRRQLPPVP
DEG_APCC_DBOX_1
0.1389
p.L2170F
NCI-H1770
lung
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.1389
p.L2169I
SIDM01609
Endometrial Carcinoma
GDSC
SRRQLPPVP
DEG_APCC_DBOX_1
0.1667
p.L2152M
ACH-000707
Lymphoma
CCLE
SRRQLPPVP
DEG_APCC_DBOX_1
0.25
p.L2152M
ACH-002252
Lymphoma
CCLE
SRRQLPPVP
DEG_APCC_DBOX_1
0.25
p.L2152M
JiyoyeP-2003
haematopoietic_and_lymphoid_tissue
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.25
p.N2169S
ACH-001568
Skin Cancer
CCLE
SRRQLPPVP
DEG_APCC_DBOX_1
0.1667
p.N2169S
ACH-002159
Skin Cancer
CCLE
SRRQLPPVP
DEG_APCC_DBOX_1
0.1667
p.N2169S
M14
skin
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.1667
p.L2169F
NCI-H1770
lung
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.1667
p.N2150S
M14
skin
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.1944
p.S2146R
NALM-6
haematopoietic_and_lymphoid_tissue
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.0833
p.E2147K
DBTRG-05MG
central_nervous_system
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.1111
p.R2156W
HCC2998
large_intestine
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.8634
p.L2151F
NCI-H1770
lung
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.2222
p.S2170R
NALM-6
haematopoietic_and_lymphoid_tissue
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.1389
p.P2160H
DU-145
prostate
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.6583
p.E2171K
DBTRG-05MG
central_nervous_system
COSMIC
SRRQLPPVP
DEG_APCC_DBOX_1
0.1111
Drug responses associated with CACNA1E mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRRQLPPVP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15878
Voltage-dependent R-type calcium channel subunit alpha-1E
DEG_APCC_DBOX_1
2155:2163
SRRQLPPVP
APC,CDC20,FZR1
0.9659
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