DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
SRRRLHRIH
Uniprot ID:
P04554
Source protein:
Protamine-2
Source gene:
PRM2
Class:
DEG_APCC_DBOX_1
Location:
59:67
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9445
ASA_SCORE:
124.4333
COIL:
0.4848
CONS_SCORE:
0.9196
DSS_SCORE:
0.5572
HELIX:
0.4648
FCONS_SCORE:
1.0108
RIG_SCORE:
0.6928
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R60Q
TCGA-CR-5248
HNSC
TCGA
SRRRLHRIH
DEG_APCC_DBOX_1
0.7329
p.R60Q
DO14694
HNSC
ICGC
SRRRLHRIH
DEG_APCC_DBOX_1
0.7329
p.R77H
TCGA-D5-6530
COAD
TCGA
SRRRLHRIH
DEG_APCC_DBOX_1
0.0556
p.R77H
TCGA-J9-A52C
PRAD
TCGA
SRRRLHRIH
DEG_APCC_DBOX_1
0.0556
p.R77H
DO8312
COAD
ICGC
SRRRLHRIH
DEG_APCC_DBOX_1
0.0556
p.R77H
DO51343
PRAD
ICGC
SRRRLHRIH
DEG_APCC_DBOX_1
0.0556
p.R72C
TCGA-EE-A3JD
SKCM
TCGA
SRRRLHRIH
DEG_APCC_DBOX_1
0.1944
p.R72C
DO50299
SKCM
ICGC
SRRRLHRIH
DEG_APCC_DBOX_1
0.1944
p.R55H
TCGA-EI-6917
READ
TCGA
SRRRLHRIH
DEG_APCC_DBOX_1
0.2222
p.R55H
DO36881
READ
ICGC
SRRRLHRIH
DEG_APCC_DBOX_1
0.2222
p.R55C
TCGA-FI-A2D0
UCEC
TCGA
SRRRLHRIH
DEG_APCC_DBOX_1
0.2222
p.R55C
DO43891
UCEC
ICGC
SRRRLHRIH
DEG_APCC_DBOX_1
0.2222
p.S73Y
TCGA-FS-A1ZG
SKCM
TCGA
SRRRLHRIH
DEG_APCC_DBOX_1
0.1667
p.S73Y
DO37523
SKCM
ICGC
SRRRLHRIH
DEG_APCC_DBOX_1
0.1667
p.H52N
TCGA-GU-AATQ
BLCA
TCGA
SRRRLHRIH
DEG_APCC_DBOX_1
0.1389
p.H52N
DO51896
BLCA
ICGC
SRRRLHRIH
DEG_APCC_DBOX_1
0.1389
p.H52D
DO48390
BLCA
ICGC
SRRRLHRIH
DEG_APCC_DBOX_1
0.1389
p.H67N
DO228952
LICA
ICGC
SRRRLHRIH
DEG_APCC_DBOX_1
0.6312
p.S51Y
DO229029
LICA
ICGC
SRRRLHRIH
DEG_APCC_DBOX_1
0.1111
p.R55S
DO229009
LICA
ICGC
SRRRLHRIH
DEG_APCC_DBOX_1
0.2222
p.H71Y
SIDM01156
Small Cell Lung Carcinoma
GDSC
SRRRLHRIH
DEG_APCC_DBOX_1
0.2222
p.C74Y
SIDM00250
Esophageal Squamous Cell Carcinoma
GDSC
SRRRLHRIH
DEG_APCC_DBOX_1
0.1389
p.C74Y
ACH-000917
Esophageal Cancer
CCLE
SRRRLHRIH
DEG_APCC_DBOX_1
0.1389
p.C74Y
TE-4
oesophagus
COSMIC
SRRRLHRIH
DEG_APCC_DBOX_1
0.1389
p.R72H
SIDM00145
T-Lymphoblastic Leukemia
GDSC
SRRRLHRIH
DEG_APCC_DBOX_1
0.1944
p.R72H
ACH-001127
Leukemia
CCLE
SRRRLHRIH
DEG_APCC_DBOX_1
0.1944
p.R72H
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
SRRRLHRIH
DEG_APCC_DBOX_1
0.1944
Drug responses associated with PRM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRRRLHRIH
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P04554
Protamine-2
DEG_APCC_DBOX_1
59:67
SRRRLHRIH
APC,CDC20,FZR1
0.9445
More...