DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRSDLDNLP
Uniprot ID:
Q9H3M0
Source protein:
Potassium voltage-gated channel subfamily F member 1
Source gene:
KCNF1
Class:
DEG_APCC_DBOX_1
Location:
445:453
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9754
ASA_SCORE:
83.3222
COIL:
0.8414
CONS_SCORE:
0.454
DSS_SCORE:
0.7479
HELIX:
0.133
FCONS_SCORE:
1.1104
RIG_SCORE:
0.5987
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G438C
TCGA-06-5416
GBM
TCGA
SRSDLDNLP
DEG_APCC_DBOX_1
0.1389
p.G438C
DO10880
GBM
ICGC
SRSDLDNLP
DEG_APCC_DBOX_1
0.1389
p.A457T
TCGA-12-0818
GBM
TCGA
SRSDLDNLP
DEG_APCC_DBOX_1
0.2222
p.A457T
DO12892
GBM
ICGC
SRSDLDNLP
DEG_APCC_DBOX_1
0.2222
p.P456H
TCGA-78-7537
LUAD
TCGA
SRSDLDNLP
DEG_APCC_DBOX_1
0.25
p.P456H
DO23574
LUAD
ICGC
SRSDLDNLP
DEG_APCC_DBOX_1
0.25
p.E439K
TCGA-AN-A046
BRCA
TCGA
SRSDLDNLP
DEG_APCC_DBOX_1
0.1667
p.E439K
TCGA-DC-6155
READ
TCGA
SRSDLDNLP
DEG_APCC_DBOX_1
0.1667
p.E439K
DO1285
BRCA
ICGC
SRSDLDNLP
DEG_APCC_DBOX_1
0.1667
p.E439K
DO36953
READ
ICGC
SRSDLDNLP
DEG_APCC_DBOX_1
0.1667
p.R446H
TCGA-AP-A1DK
UCEC
TCGA
SRSDLDNLP
DEG_APCC_DBOX_1
0.8244
p.R446H
DO42033
UCEC
ICGC
SRSDLDNLP
DEG_APCC_DBOX_1
0.8244
p.P462L
TCGA-FW-A3TU
SKCM
TCGA
SRSDLDNLP
DEG_APCC_DBOX_1
0.0833
p.P462L
DO37441
SKCM
ICGC
SRSDLDNLP
DEG_APCC_DBOX_1
0.0833
p.S445F
TCGA-GN-A266
SKCM
TCGA
SRSDLDNLP
DEG_APCC_DBOX_1
0.6871
p.S445F
DO37432
SKCM
ICGC
SRSDLDNLP
DEG_APCC_DBOX_1
0.6871
p.G458V
TCGA-S2-AA1A
LUAD
TCGA
SRSDLDNLP
DEG_APCC_DBOX_1
0.1944
p.G458V
DO51205
LUAD
ICGC
SRSDLDNLP
DEG_APCC_DBOX_1
0.1944
p.R446C
DO227867
COCA
ICGC
SRSDLDNLP
DEG_APCC_DBOX_1
0.8301
p.A461G
SIDM00803
Kidney Carcinoma
GDSC
SRSDLDNLP
DEG_APCC_DBOX_1
0.1111
p.P454L
SIDM01026
Esophageal Squamous Cell Carcinoma
GDSC
SRSDLDNLP
DEG_APCC_DBOX_1
0.3056
p.P454L
ACH-000824
Esophageal Cancer
CCLE
SRSDLDNLP
DEG_APCC_DBOX_1
0.3056
p.P454L
KYSE-510
oesophagus
COSMIC
SRSDLDNLP
DEG_APCC_DBOX_1
0.3056
p.L452P
ACH-000920
Leukemia
CCLE
SRSDLDNLP
DEG_APCC_DBOX_1
0.7582
p.L452P
CML-T1
haematopoietic_and_lymphoid_tissue
COSMIC
SRSDLDNLP
DEG_APCC_DBOX_1
0.7582
p.A457V
ACH-000954
Endometrial/Uterine Cancer
CCLE
SRSDLDNLP
DEG_APCC_DBOX_1
0.2222
p.P454S
ACH-001408
Bladder Cancer
CCLE
SRSDLDNLP
DEG_APCC_DBOX_1
0.3056
p.T442N
ACH-001793
Liposarcoma
CCLE
SRSDLDNLP
DEG_APCC_DBOX_1
0.25
Drug responses associated with KCNF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRSDLDNLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H3M0
Potassium voltage-gated channel subfamily F member 1
DEG_APCC_DBOX_1
445:453
SRSDLDNLP
APC,CDC20,FZR1
0.9754
More...