DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRSKLQELR
Uniprot ID:
O15018
Source protein:
PDZ domain-containing protein 2
Source gene:
PDZD2
Class:
DEG_APCC_DBOX_1
Location:
2478:2486
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.991
ASA_SCORE:
101.1444
COIL:
0.4594
CONS_SCORE:
0.4849
DSS_SCORE:
0.5642
HELIX:
0.5176
FCONS_SCORE:
1.0209
RIG_SCORE:
0.7287
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D2494G
TCGA-AP-A0LM
UCEC
TCGA
SRSKLQELR
DEG_APCC_DBOX_1
0.1111
p.D2494G
DO43306
UCEC
ICGC
SRSKLQELR
DEG_APCC_DBOX_1
0.1111
p.S2475L
TCGA-D1-A103
UCEC
TCGA
SRSKLQELR
DEG_APCC_DBOX_1
0.6944
p.S2475L
DO42312
UCEC
ICGC
SRSKLQELR
DEG_APCC_DBOX_1
0.6944
p.L2493I
TCGA-DU-6392
LGG
TCGA
SRSKLQELR
DEG_APCC_DBOX_1
0.1389
p.L2493I
DO22237
LGG
ICGC
SRSKLQELR
DEG_APCC_DBOX_1
0.1389
p.T2472M
TCGA-EA-A3HS
CESC
TCGA
SRSKLQELR
DEG_APCC_DBOX_1
0.6111
p.T2472M
DO6260
CESC
ICGC
SRSKLQELR
DEG_APCC_DBOX_1
0.6111
p.E2484K
TCGA-GC-A3OO
BLCA
TCGA
SRSKLQELR
DEG_APCC_DBOX_1
0.591
p.E2484K
DO518
BLCA
ICGC
SRSKLQELR
DEG_APCC_DBOX_1
0.591
p.V2477M
TCGA-IG-A5S3
ESCA
TCGA
SRSKLQELR
DEG_APCC_DBOX_1
0.3056
p.R2479C
DO233916
GACA
ICGC
SRSKLQELR
DEG_APCC_DBOX_1
0.8301
p.R2470H
SIDM01951
Colorectal Carcinoma
GDSC
SRSKLQELR
DEG_APCC_DBOX_1
0.1111
p.K2495R
SIDM00969
Ovarian Carcinoma
GDSC
SRSKLQELR
DEG_APCC_DBOX_1
0.1944
p.K2495R
DOV13
ovary
COSMIC
SRSKLQELR
DEG_APCC_DBOX_1
0.1944
p.V2469L
SIDM00598
Squamous Cell Lung Carcinoma
GDSC
SRSKLQELR
DEG_APCC_DBOX_1
0.0833
p.V2469L
ACH-000843
Lung Cancer
CCLE
SRSKLQELR
DEG_APCC_DBOX_1
0.0833
p.V2469L
HARA
lung
COSMIC
SRSKLQELR
DEG_APCC_DBOX_1
0.0833
p.V2469E
SIDM00859
B-Cell Non-Hodgkin's Lymphoma
GDSC
SRSKLQELR
DEG_APCC_DBOX_1
0.0833
p.V2469E
Farage
haematopoietic_and_lymphoid_tissue
COSMIC
SRSKLQELR
DEG_APCC_DBOX_1
0.0833
p.R2486T
SIDM00015
Esophageal Squamous Cell Carcinoma
GDSC
SRSKLQELR
DEG_APCC_DBOX_1
0.6765
p.R2486T
ACH-000777
Esophageal Cancer
CCLE
SRSKLQELR
DEG_APCC_DBOX_1
0.6765
Drug responses associated with PDZD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRSKLQELR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15018
PDZ domain-containing protein 2
DEG_APCC_DBOX_1
2478:2486
SRSKLQELR
APC,CDC20,FZR1
0.991
More...