DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SRSLLNRLP
Uniprot ID:
Q5T2D2
Source protein:
Trem-like transcript 2 protein
Source gene:
TREML2
Class:
DEG_APCC_DBOX_1
Location:
248:256
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.78
ASA_SCORE:
84.0444
COIL:
0.8039
CONS_SCORE:
0.3384
DSS_SCORE:
0.3217
HELIX:
0.1412
FCONS_SCORE:
0.7662
RIG_SCORE:
0.7818
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S239L
TCGA-A6-6653
COAD
TCGA
SRSLLNRLP
DEG_APCC_DBOX_1
0.5278
p.S239L
DO10373
COAD
ICGC
SRSLLNRLP
DEG_APCC_DBOX_1
0.5278
p.T241I
TCGA-AP-A054
UCEC
TCGA
SRSLLNRLP
DEG_APCC_DBOX_1
0.1389
p.T241I
DO42256
UCEC
ICGC
SRSLLNRLP
DEG_APCC_DBOX_1
0.1389
p.S248N
TCGA-EO-A3B0
UCEC
TCGA
SRSLLNRLP
DEG_APCC_DBOX_1
0.5958
p.S248N
DO219773
UCEC
ICGC
SRSLLNRLP
DEG_APCC_DBOX_1
0.5958
p.S248G
DO230950
LUSC
ICGC
SRSLLNRLP
DEG_APCC_DBOX_1
0.5882
p.S248G
DO224638
LUSC
ICGC
SRSLLNRLP
DEG_APCC_DBOX_1
0.5882
p.S248R
SIDM00001
Other Blood Cancers
GDSC
SRSLLNRLP
DEG_APCC_DBOX_1
0.6316
p.S248R
SIDM00521
Small Cell Lung Carcinoma
GDSC
SRSLLNRLP
DEG_APCC_DBOX_1
0.6316
p.S248R
SIDM00984
Other Blood Cancers
GDSC
SRSLLNRLP
DEG_APCC_DBOX_1
0.6316
p.S248R
SIDM00623
Other Blood Cancers
GDSC
SRSLLNRLP
DEG_APCC_DBOX_1
0.6316
p.S248R
SIDM01186
Breast Carcinoma
GDSC
SRSLLNRLP
DEG_APCC_DBOX_1
0.6316
p.S248R
SIDM00098
Mesothelioma
GDSC
SRSLLNRLP
DEG_APCC_DBOX_1
0.6316
p.S248R
SIDM01681
Non-Cancerous
GDSC
SRSLLNRLP
DEG_APCC_DBOX_1
0.6316
p.S248R
SIDM00205
Ewing's Sarcoma
GDSC
SRSLLNRLP
DEG_APCC_DBOX_1
0.6316
p.S248R
SIDM00980
Gastric Carcinoma
GDSC
SRSLLNRLP
DEG_APCC_DBOX_1
0.6316
p.S248R
SIDM00628
Breast Carcinoma
GDSC
SRSLLNRLP
DEG_APCC_DBOX_1
0.6316
p.G243R
SIDM00309
Mesothelioma
GDSC
SRSLLNRLP
DEG_APCC_DBOX_1
0.1944
p.G243R
ACH-002131
Lung Cancer
CCLE
SRSLLNRLP
DEG_APCC_DBOX_1
0.1944
p.G243R
H2803
pleura
COSMIC
SRSLLNRLP
DEG_APCC_DBOX_1
0.1944
Drug responses associated with TREML2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRSLLNRLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T2D2
Trem-like transcript 2 protein
DEG_APCC_DBOX_1
248:256
SRSLLNRLP
APC,CDC20,FZR1
0.78
More...