DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
SRSPLHPMS
Uniprot ID:
Q9NVW2
Source protein:
E3 ubiquitin-protein ligase RLIM
Source gene:
RLIM
Class:
DEG_APCC_DBOX_1
Location:
228:236
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9392
ASA_SCORE:
86.1778
COIL:
0.8973
CONS_SCORE:
0.3564
DSS_SCORE:
0.7602
HELIX:
0.0736
FCONS_SCORE:
1.0051
RIG_SCORE:
0.5537
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M235V
TCGA-44-7659
LUAD
TCGA
SRSPLHPMS
DEG_APCC_DBOX_1
0.6097
p.M235V
DO24310
LUAD
ICGC
SRSPLHPMS
DEG_APCC_DBOX_1
0.6097
p.R227S
TCGA-55-A48X
LUAD
TCGA
SRSPLHPMS
DEG_APCC_DBOX_1
0.3056
p.R227S
DO24048
LUAD
ICGC
SRSPLHPMS
DEG_APCC_DBOX_1
0.3056
p.H244R
TCGA-98-8021
LUSC
TCGA
SRSPLHPMS
DEG_APCC_DBOX_1
0.1111
p.H244R
DO27468
LUSC
ICGC
SRSPLHPMS
DEG_APCC_DBOX_1
0.1111
p.P234A
TCGA-B5-A11N
UCEC
TCGA
SRSPLHPMS
DEG_APCC_DBOX_1
0.6392
p.P234A
DO41458
UCEC
ICGC
SRSPLHPMS
DEG_APCC_DBOX_1
0.6392
p.E226K
TCGA-CR-7388
HNSC
TCGA
SRSPLHPMS
DEG_APCC_DBOX_1
0.2778
p.E226K
DO14284
HNSC
ICGC
SRSPLHPMS
DEG_APCC_DBOX_1
0.2778
p.R219W
TCGA-EE-A2GD
SKCM
TCGA
SRSPLHPMS
DEG_APCC_DBOX_1
0.0833
p.R219W
DO233634
GACA
ICGC
SRSPLHPMS
DEG_APCC_DBOX_1
0.0833
p.R219W
DO37603
SKCM
ICGC
SRSPLHPMS
DEG_APCC_DBOX_1
0.0833
p.P234T
DO228952
LICA
ICGC
SRSPLHPMS
DEG_APCC_DBOX_1
0.5919
p.I238V
DO23516
LIRI
ICGC
SRSPLHPMS
DEG_APCC_DBOX_1
0.2778
p.H233R
ACH-000961
Endometrial/Uterine Cancer
CCLE
SRSPLHPMS
DEG_APCC_DBOX_1
0.7133
Drug responses associated with RLIM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRSPLHPMS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NVW2
E3 ubiquitin-protein ligase RLIM
DEG_APCC_DBOX_1
228:236
SRSPLHPMS
APC,CDC20,FZR1
0.9392
More...