DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRSQLSSLQ
Uniprot ID:
Q17RW2
Source protein:
Collagen alpha-1
Source gene:
COL24A1
Class:
DEG_APCC_DBOX_1
Location:
310:318
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6642
ASA_SCORE:
81.9222
COIL:
0.7768
CONS_SCORE:
0.2948
DSS_SCORE:
0.4757
HELIX:
0.15
FCONS_SCORE:
0.9134
RIG_SCORE:
0.6798
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K303R
TCGA-16-0848
GBM
TCGA
SRSQLSSLQ
DEG_APCC_DBOX_1
0.25
p.K303R
DO12196
GBM
ICGC
SRSQLSSLQ
DEG_APCC_DBOX_1
0.25
p.H307Y
TCGA-19-5956
GBM
TCGA
SRSQLSSLQ
DEG_APCC_DBOX_1
0.25
p.H307Y
DO13863
GBM
ICGC
SRSQLSSLQ
DEG_APCC_DBOX_1
0.25
p.Q308H
TCGA-60-2698
LUSC
TCGA
SRSQLSSLQ
DEG_APCC_DBOX_1
0.2778
p.Q308H
DO26469
LUSC
ICGC
SRSQLSSLQ
DEG_APCC_DBOX_1
0.2778
p.V322I
TCGA-86-A4JF
LUAD
TCGA
SRSQLSSLQ
DEG_APCC_DBOX_1
0.2222
p.V322I
DO45317
LUAD
ICGC
SRSQLSSLQ
DEG_APCC_DBOX_1
0.2222
p.R311I
TCGA-BS-A0UF
UCEC
TCGA
SRSQLSSLQ
DEG_APCC_DBOX_1
0.8102
p.R311I
DO41488
UCEC
ICGC
SRSQLSSLQ
DEG_APCC_DBOX_1
0.8102
p.T300A
TCGA-BS-A0UV
UCEC
TCGA
SRSQLSSLQ
DEG_APCC_DBOX_1
0.0556
p.T300A
DO42793
UCEC
ICGC
SRSQLSSLQ
DEG_APCC_DBOX_1
0.0556
p.V301A
TCGA-CG-5721
STAD
TCGA
SRSQLSSLQ
DEG_APCC_DBOX_1
0.0833
p.V301A
DO38192
STAD
ICGC
SRSQLSSLQ
DEG_APCC_DBOX_1
0.0833
p.L317P
TCGA-KU-A66S
HNSC
TCGA
SRSQLSSLQ
DEG_APCC_DBOX_1
0.7582
p.L317P
DO44456
HNSC
ICGC
SRSQLSSLQ
DEG_APCC_DBOX_1
0.7582
p.S312C
DO227871
BRCA
ICGC
SRSQLSSLQ
DEG_APCC_DBOX_1
0.643
p.R304T
DO223492
CLLE
ICGC
SRSQLSSLQ
DEG_APCC_DBOX_1
0.1667
p.S312F
SIDM00796
Head and Neck Carcinoma
GDSC
SRSQLSSLQ
DEG_APCC_DBOX_1
0.6871
p.S312F
ACH-000740
Head and Neck Cancer
CCLE
SRSQLSSLQ
DEG_APCC_DBOX_1
0.6871
p.S312F
A253
salivary_gland
COSMIC
SRSQLSSLQ
DEG_APCC_DBOX_1
0.6871
Drug responses associated with COL24A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRSQLSSLQ
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q17RW2
Collagen alpha-1
DEG_APCC_DBOX_1
310:318
SRSQLSSLQ
APC,CDC20,FZR1
0.6642
More...