DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRSSLKPIK
Uniprot ID:
Q6KC79
Source protein:
Nipped-B-like protein
Source gene:
NIPBL
Class:
DEG_APCC_DBOX_1
Location:
1024:1032
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9841
ASA_SCORE:
110.7111
COIL:
0.8131
CONS_SCORE:
0.1872
DSS_SCORE:
0.6381
HELIX:
0.1697
FCONS_SCORE:
0.8601
RIG_SCORE:
0.6504
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1025I
TCGA-19-5956
GBM
TCGA
SRSSLKPIK
DEG_APCC_DBOX_1
0.8102
p.R1025I
DO13863
GBM
ICGC
SRSSLKPIK
DEG_APCC_DBOX_1
0.8102
p.E1021D
TCGA-38-4625
LUAD
TCGA
SRSSLKPIK
DEG_APCC_DBOX_1
0.25
p.E1021D
TCGA-A5-A0G2
UCEC
TCGA
SRSSLKPIK
DEG_APCC_DBOX_1
0.25
p.E1021D
DO23952
LUAD
ICGC
SRSSLKPIK
DEG_APCC_DBOX_1
0.25
p.E1021D
DO41235
UCEC
ICGC
SRSSLKPIK
DEG_APCC_DBOX_1
0.25
p.K1032N
TCGA-AJ-A3EL
UCEC
TCGA
SRSSLKPIK
DEG_APCC_DBOX_1
0.5806
p.K1032N
DO41542
UCEC
ICGC
SRSSLKPIK
DEG_APCC_DBOX_1
0.5806
p.R1020G
TCGA-CN-5373
HNSC
TCGA
SRSSLKPIK
DEG_APCC_DBOX_1
0.2222
p.R1020G
DO16101
HNSC
ICGC
SRSSLKPIK
DEG_APCC_DBOX_1
0.2222
p.S1026R
TCGA-EE-A29D
SKCM
TCGA
SRSSLKPIK
DEG_APCC_DBOX_1
0.6316
p.S1026R
DO38123
SKCM
ICGC
SRSSLKPIK
DEG_APCC_DBOX_1
0.6316
p.K1040E
TCGA-EO-A22X
UCEC
TCGA
SRSSLKPIK
DEG_APCC_DBOX_1
0.5556
p.K1040E
DO43907
UCEC
ICGC
SRSSLKPIK
DEG_APCC_DBOX_1
0.5556
p.R1020K
DO11854
GBM
ICGC
SRSSLKPIK
DEG_APCC_DBOX_1
0.2222
p.D1022G
SIDM00683
Prostate Carcinoma
GDSC
SRSSLKPIK
DEG_APCC_DBOX_1
0.2778
p.D1022G
ACH-000977
lymph_node
CCLE
SRSSLKPIK
DEG_APCC_DBOX_1
0.2778
p.D1022G
LNCaP-Clone-FGC
prostate
COSMIC
SRSSLKPIK
DEG_APCC_DBOX_1
0.2778
p.L1016R
SIDM00193
Colorectal Carcinoma
GDSC
SRSSLKPIK
DEG_APCC_DBOX_1
0.1111
p.L1016R
ACH-000991
Colon/Colorectal Cancer
CCLE
SRSSLKPIK
DEG_APCC_DBOX_1
0.1111
p.L1016R
SNU-81
large_intestine
COSMIC
SRSSLKPIK
DEG_APCC_DBOX_1
0.1111
p.K1034E
SIDM00149
Melanoma
GDSC
SRSSLKPIK
DEG_APCC_DBOX_1
0.2778
p.K1034E
ACH-000750
Skin Cancer
CCLE
SRSSLKPIK
DEG_APCC_DBOX_1
0.2778
p.K1034E
LOXIMVI
skin
COSMIC
SRSSLKPIK
DEG_APCC_DBOX_1
0.2778
p.S1042N
SIDM00118
Colorectal Carcinoma
GDSC
SRSSLKPIK
DEG_APCC_DBOX_1
0.5
p.S1042N
ACH-001081
Colon/Colorectal Cancer
CCLE
SRSSLKPIK
DEG_APCC_DBOX_1
0.5
p.S1042N
HCC2998
large_intestine
COSMIC
SRSSLKPIK
DEG_APCC_DBOX_1
0.5
Drug responses associated with NIPBL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRSSLKPIK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6KC79
Nipped-B-like protein
DEG_APCC_DBOX_1
1024:1032
SRSSLKPIK
APC,CDC20,FZR1
0.9841
More...