DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRTTLDRME
Uniprot ID:
Q9H1Z4
Source protein:
WD repeat-containing protein 13
Source gene:
WDR13
Class:
DEG_APCC_DBOX_1
Location:
86:94
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5937
ASA_SCORE:
38.5889
COIL:
0.449
CONS_SCORE:
0.5826
DSS_SCORE:
0.5005
HELIX:
0.015
FCONS_SCORE:
1.1002
RIG_SCORE:
0.7278
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y78F
TCGA-44-2657
LUAD
TCGA
SRTTLDRME
DEG_APCC_DBOX_1
0.1111
p.Y78F
DO25020
LUAD
ICGC
SRTTLDRME
DEG_APCC_DBOX_1
0.1111
p.V83I
TCGA-AA-3854
COAD
TCGA
SRTTLDRME
DEG_APCC_DBOX_1
0.25
p.V83I
DO10148
COAD
ICGC
SRTTLDRME
DEG_APCC_DBOX_1
0.25
p.A77S
TCGA-CK-4951
COAD
TCGA
SRTTLDRME
DEG_APCC_DBOX_1
0.0833
p.A77S
DO10582
COAD
ICGC
SRTTLDRME
DEG_APCC_DBOX_1
0.0833
p.D99N
TCGA-D3-A8GV
SKCM
TCGA
SRTTLDRME
DEG_APCC_DBOX_1
0.1944
p.D99N
DO219477
SKCM
ICGC
SRTTLDRME
DEG_APCC_DBOX_1
0.1944
p.L90F
TCGA-DK-A3IS
BLCA
TCGA
SRTTLDRME
DEG_APCC_DBOX_1
0.6981
p.L90F
DO566
BLCA
ICGC
SRTTLDRME
DEG_APCC_DBOX_1
0.6981
p.L90F
ACH-001377
Pancreatic Cancer
CCLE
SRTTLDRME
DEG_APCC_DBOX_1
0.6981
p.R92S
TCGA-EE-A3AC
SKCM
TCGA
SRTTLDRME
DEG_APCC_DBOX_1
0.6316
p.R92S
DO37631
SKCM
ICGC
SRTTLDRME
DEG_APCC_DBOX_1
0.6316
p.R92H
DO233941
GACA
ICGC
SRTTLDRME
DEG_APCC_DBOX_1
0.7133
p.R84S
DO229044
LICA
ICGC
SRTTLDRME
DEG_APCC_DBOX_1
0.2778
p.R87H
SIDM00839
Colorectal Carcinoma
GDSC
SRTTLDRME
DEG_APCC_DBOX_1
0.8244
p.R87H
ACH-000950
Colon/Colorectal Cancer
CCLE
SRTTLDRME
DEG_APCC_DBOX_1
0.8244
p.R87H
LoVo
large_intestine
COSMIC
SRTTLDRME
DEG_APCC_DBOX_1
0.8244
Drug responses associated with WDR13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRTTLDRME
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H1Z4
WD repeat-containing protein 13
DEG_APCC_DBOX_1
86:94
SRTTLDRME
APC,CDC20,FZR1
0.5937
More...