DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
SRTVLHRLT
Uniprot ID:
Q9UQ05
Source protein:
Potassium voltage-gated channel subfamily H member 4
Source gene:
KCNH4
Class:
DEG_APCC_DBOX_1
Location:
172:180
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9981
ASA_SCORE:
104.2778
COIL:
0.7328
CONS_SCORE:
0.459
DSS_SCORE:
0.5677
HELIX:
0.1449
FCONS_SCORE:
1.3394
RIG_SCORE:
0.748
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R173H
TCGA-17-Z015
LUAD
TCGA
SRTVLHRLT
DEG_APCC_DBOX_1
0.8244
p.R173H
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
SRTVLHRLT
DEG_APCC_DBOX_1
0.8244
p.R173H
ACH-000951
Lung Cancer
CCLE
SRTVLHRLT
DEG_APCC_DBOX_1
0.8244
p.R173H
NCI-H2342
lung
COSMIC
SRTVLHRLT
DEG_APCC_DBOX_1
0.8244
p.Q188H
TCGA-49-AAR2
LUAD
TCGA
SRTVLHRLT
DEG_APCC_DBOX_1
0.1111
p.Q188H
DO218918
LUAD
ICGC
SRTVLHRLT
DEG_APCC_DBOX_1
0.1111
p.R178Q
TCGA-59-2349
OV
TCGA
SRTVLHRLT
DEG_APCC_DBOX_1
0.6218
p.R178Q
DO233896
GACA
ICGC
SRTVLHRLT
DEG_APCC_DBOX_1
0.6218
p.R178Q
DO28621
OV
ICGC
SRTVLHRLT
DEG_APCC_DBOX_1
0.6218
p.R166W
TCGA-B5-A0JY
UCEC
TCGA
SRTVLHRLT
DEG_APCC_DBOX_1
0.1667
p.R166W
DO43041
UCEC
ICGC
SRTVLHRLT
DEG_APCC_DBOX_1
0.1667
p.R185L
TCGA-CC-A8HV
LIHC
TCGA
SRTVLHRLT
DEG_APCC_DBOX_1
0.1944
p.R185L
DO52189
LIHC
ICGC
SRTVLHRLT
DEG_APCC_DBOX_1
0.1944
p.R185H
DO230343
COCA
ICGC
SRTVLHRLT
DEG_APCC_DBOX_1
0.1944
p.T174A
DO233168
GACA
ICGC
SRTVLHRLT
DEG_APCC_DBOX_1
0.6028
p.A168D
DO229026
LICA
ICGC
SRTVLHRLT
DEG_APCC_DBOX_1
0.2222
p.H177Q
DO229036
LICA
ICGC
SRTVLHRLT
DEG_APCC_DBOX_1
0.647
p.R166Q
SIDM00588
Oral Cavity Carcinoma
GDSC
SRTVLHRLT
DEG_APCC_DBOX_1
0.1667
p.R166Q
ACH-000546
Head and Neck Cancer
CCLE
SRTVLHRLT
DEG_APCC_DBOX_1
0.1667
p.R166Q
HSC-4
upper_aerodigestive_tract
COSMIC
SRTVLHRLT
DEG_APCC_DBOX_1
0.1667
p.G190C
SIDM00217
Colorectal Carcinoma
GDSC
SRTVLHRLT
DEG_APCC_DBOX_1
0.0556
p.G190C
ACH-000999
Colon/Colorectal Cancer
CCLE
SRTVLHRLT
DEG_APCC_DBOX_1
0.0556
p.G190C
SNU-1040
large_intestine
COSMIC
SRTVLHRLT
DEG_APCC_DBOX_1
0.0556
p.T162N
NCI-H630
large_intestine
COSMIC
SRTVLHRLT
DEG_APCC_DBOX_1
0.0556
Drug responses associated with KCNH4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRTVLHRLT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UQ05
Potassium voltage-gated channel subfamily H member 4
DEG_APCC_DBOX_1
172:180
SRTVLHRLT
APC,CDC20,FZR1
0.9981
More...