DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRVILQPVE
Uniprot ID:
Q15262
Source protein:
Receptor-type tyrosine-protein phosphatase kappa
Source gene:
PTPRK
Class:
DEG_APCC_DBOX_1
Location:
925:933
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8384
ASA_SCORE:
50.7
COIL:
0.5568
CONS_SCORE:
0.4738
DSS_SCORE:
0.3924
HELIX:
0.0108
FCONS_SCORE:
0.9838
RIG_SCORE:
0.7899
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V933L
TCGA-55-8620
LUAD
TCGA
SRVILQPVE
DEG_APCC_DBOX_1
0.6765
p.N915T
TCGA-AA-3845
COAD
TCGA
SRVILQPVE
DEG_APCC_DBOX_1
0.0556
p.N915T
TCGA-CM-6674
COAD
TCGA
SRVILQPVE
DEG_APCC_DBOX_1
0.0556
p.N915T
ACH-000919
Gastric Cancer
CCLE
SRVILQPVE
DEG_APCC_DBOX_1
0.0556
p.N915T
IM-95
stomach
COSMIC
SRVILQPVE
DEG_APCC_DBOX_1
0.0556
p.R916Q
TCGA-AX-A3G8
UCEC
TCGA
SRVILQPVE
DEG_APCC_DBOX_1
0.5278
p.N915K
TCGA-BR-4292
STAD
TCGA
SRVILQPVE
DEG_APCC_DBOX_1
0.0556
p.G918V
TCGA-BT-A3PH
BLCA
TCGA
SRVILQPVE
DEG_APCC_DBOX_1
0.1389
p.P937S
TCGA-CG-5728
STAD
TCGA
SRVILQPVE
DEG_APCC_DBOX_1
0.2222
p.D924N
TCGA-DX-AB2E
SARC
TCGA
SRVILQPVE
DEG_APCC_DBOX_1
0.3056
p.D930H
DO44377
CESC
ICGC
SRVILQPVE
DEG_APCC_DBOX_1
0.7688
p.N941T
DO10020
COAD
ICGC
SRVILQPVE
DEG_APCC_DBOX_1
0.1111
p.N941T
DO10092
COAD
ICGC
SRVILQPVE
DEG_APCC_DBOX_1
0.1111
p.N941T
IM-95
stomach
COSMIC
SRVILQPVE
DEG_APCC_DBOX_1
0.1111
p.E919K
DO31949
OV
ICGC
SRVILQPVE
DEG_APCC_DBOX_1
0.1667
p.R942L
DO32829
PACA
ICGC
SRVILQPVE
DEG_APCC_DBOX_1
0.0833
p.E917K
DO50287
SKCM
ICGC
SRVILQPVE
DEG_APCC_DBOX_1
0.1111
p.N941K
DO38495
STAD
ICGC
SRVILQPVE
DEG_APCC_DBOX_1
0.1111
p.V931I
DO229248
THCA
ICGC
SRVILQPVE
DEG_APCC_DBOX_1
0.7076
p.R942Q
DO41014
UCEC
ICGC
SRVILQPVE
DEG_APCC_DBOX_1
0.0833
p.A917S
SIDM00926
Non-Small Cell Lung Carcinoma
GDSC
SRVILQPVE
DEG_APCC_DBOX_1
0.1111
p.A917S
NCI-H2172
lung
COSMIC
SRVILQPVE
DEG_APCC_DBOX_1
0.1111
p.N931T
SIDM00602
Gastric Carcinoma
GDSC
SRVILQPVE
DEG_APCC_DBOX_1
0.7055
p.N931T
IM-95
stomach
COSMIC
SRVILQPVE
DEG_APCC_DBOX_1
0.7055
p.L930M
ACH-000806
Lymphoma
CCLE
SRVILQPVE
DEG_APCC_DBOX_1
0.711
p.L930M
L-540
haematopoietic_and_lymphoid_tissue
COSMIC
SRVILQPVE
DEG_APCC_DBOX_1
0.711
p.Y918C
CAL-51
breast
COSMIC
SRVILQPVE
DEG_APCC_DBOX_1
0.1389
p.N927T
IM-95
stomach
COSMIC
SRVILQPVE
DEG_APCC_DBOX_1
0.7055
p.L929M
L-540
haematopoietic_and_lymphoid_tissue
COSMIC
SRVILQPVE
DEG_APCC_DBOX_1
0.711
p.A927S
NCI-H2172
lung
COSMIC
SRVILQPVE
DEG_APCC_DBOX_1
0.7588
p.L942M
L-540
haematopoietic_and_lymphoid_tissue
COSMIC
SRVILQPVE
DEG_APCC_DBOX_1
0.0833
Drug responses associated with PTPRK mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRVILQPVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15262
Receptor-type tyrosine-protein phosphatase kappa
DEG_APCC_DBOX_1
925:933
SRVILQPVE
APC,CDC20,FZR1
0.8384
More...