DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRVILSQLD
Uniprot ID:
P23469
Source protein:
Receptor-type tyrosine-protein phosphatase epsilon
Source gene:
PTPRE
Class:
DEG_APCC_DBOX_1
Location:
174:182
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6724
ASA_SCORE:
48.5889
COIL:
0.4591
CONS_SCORE:
0.7444
DSS_SCORE:
0.2876
HELIX:
0.0208
FCONS_SCORE:
0.9227
RIG_SCORE:
0.8063
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S174F
TCGA-AB-2833
LAML
TCGA
SRVILSQLD
DEG_APCC_DBOX_1
0.7982
p.S174F
DO21679
LAML
ICGC
SRVILSQLD
DEG_APCC_DBOX_1
0.7982
p.H173N
TCGA-D3-A1Q1
SKCM
TCGA
SRVILSQLD
DEG_APCC_DBOX_1
0.3056
p.H173N
DO37445
SKCM
ICGC
SRVILSQLD
DEG_APCC_DBOX_1
0.3056
p.P170T
TCGA-DD-A73C
LIHC
TCGA
SRVILSQLD
DEG_APCC_DBOX_1
0.2222
p.P170T
DO48593
LIHC
ICGC
SRVILSQLD
DEG_APCC_DBOX_1
0.2222
p.C186S
TCGA-EE-A29D
SKCM
TCGA
SRVILSQLD
DEG_APCC_DBOX_1
0.2222
p.C186S
DO38123
SKCM
ICGC
SRVILSQLD
DEG_APCC_DBOX_1
0.2222
p.R175M
TCGA-EE-A29E
SKCM
TCGA
SRVILSQLD
DEG_APCC_DBOX_1
0.8632
p.R175S
TCGA-EE-A2MM
SKCM
TCGA
SRVILSQLD
DEG_APCC_DBOX_1
0.7427
p.G183V
TCGA-EE-A2MM
SKCM
TCGA
SRVILSQLD
DEG_APCC_DBOX_1
0.3056
p.G183V
DO37770
SKCM
ICGC
SRVILSQLD
DEG_APCC_DBOX_1
0.3056
p.P185S
TCGA-EY-A1GI
UCEC
TCGA
SRVILSQLD
DEG_APCC_DBOX_1
0.25
p.P185S
DO41211
UCEC
ICGC
SRVILSQLD
DEG_APCC_DBOX_1
0.25
p.R175G
TCGA-FR-A8YC
SKCM
TCGA
SRVILSQLD
DEG_APCC_DBOX_1
0.7568
p.R175G
DO50301
SKCM
ICGC
SRVILSQLD
DEG_APCC_DBOX_1
0.7568
p.D182Y
DO228948
LICA
ICGC
SRVILSQLD
DEG_APCC_DBOX_1
0.6214
p.P166S
DO50725
ORCA
ICGC
SRVILSQLD
DEG_APCC_DBOX_1
0.1111
p.L169I
ACH-001610
Brain Cancer
CCLE
SRVILSQLD
DEG_APCC_DBOX_1
0.1944
Drug responses associated with PTPRE mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRVILSQLD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P23469
Receptor-type tyrosine-protein phosphatase epsilon
DEG_APCC_DBOX_1
174:182
SRVILSQLD
APC,CDC20,FZR1
0.6724
More...