DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRVKLQHLP
Uniprot ID:
Q494U1
Source protein:
Pleckstrin homology domain-containing family N member 1
Source gene:
PLEKHN1
Class:
DEG_APCC_DBOX_1
Location:
226:234
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6704
ASA_SCORE:
51.7444
COIL:
0.3971
CONS_SCORE:
0.6117
DSS_SCORE:
0.2865
HELIX:
0.0349
FCONS_SCORE:
1.1831
RIG_SCORE:
0.7884
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G219D
TCGA-G4-6588
COAD
TCGA
SRVKLQHLP
DEG_APCC_DBOX_1
0.1389
p.G219D
DO10140
COAD
ICGC
SRVKLQHLP
DEG_APCC_DBOX_1
0.1389
p.R223Q
DO233872
GACA
ICGC
SRVKLQHLP
DEG_APCC_DBOX_1
0.25
p.R223Q
DO22219
LGG
ICGC
SRVKLQHLP
DEG_APCC_DBOX_1
0.25
p.R223Q
HuO-3N1
bone
COSMIC
SRVKLQHLP
DEG_APCC_DBOX_1
0.25
p.Q238R
SIDM00683
Prostate Carcinoma
GDSC
SRVKLQHLP
DEG_APCC_DBOX_1
0.2222
p.G234V
ACH-000427
Gastric Cancer
CCLE
SRVKLQHLP
DEG_APCC_DBOX_1
0.7532
p.R241W
ACH-001382
Pancreatic Cancer
CCLE
SRVKLQHLP
DEG_APCC_DBOX_1
0.1389
p.P218L
ACH-001591
Lung Cancer
CCLE
SRVKLQHLP
DEG_APCC_DBOX_1
0.1111
p.Y223C
MRK-nu-1
breast
COSMIC
SRVKLQHLP
DEG_APCC_DBOX_1
0.25
Drug responses associated with PLEKHN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRVKLQHLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q494U1
Pleckstrin homology domain-containing family N member 1
DEG_APCC_DBOX_1
226:234
SRVKLQHLP
APC,CDC20,FZR1
0.6704
More...