DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRVKLRPLP
Uniprot ID:
P23470
Source protein:
Receptor-type tyrosine-protein phosphatase gamma
Source gene:
PTPRG
Class:
DEG_APCC_DBOX_1
Location:
889:897
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7115
ASA_SCORE:
43.8778
COIL:
0.5046
CONS_SCORE:
0.6295
DSS_SCORE:
0.4512
HELIX:
0.0108
FCONS_SCORE:
0.9705
RIG_SCORE:
0.7401
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I883V
TCGA-77-8148
LUSC
TCGA
SRVKLRPLP
DEG_APCC_DBOX_1
0.1667
p.P895L
TCGA-DA-A1I8
SKCM
TCGA
SRVKLRPLP
DEG_APCC_DBOX_1
0.6471
p.I881S
TCGA-DX-A6Z2
SARC
TCGA
SRVKLRPLP
DEG_APCC_DBOX_1
0.1111
p.P897S
TCGA-EO-A3AV
UCEC
TCGA
SRVKLRPLP
DEG_APCC_DBOX_1
0.5641
p.K892R
TCGA-FW-A3R5
SKCM
TCGA
SRVKLRPLP
DEG_APCC_DBOX_1
0.6126
p.F906V
DO8730
COAD
ICGC
SRVKLRPLP
DEG_APCC_DBOX_1
0.5278
p.G897R
DO233272
GACA
ICGC
SRVKLRPLP
DEG_APCC_DBOX_1
0.7568
p.T902A
DO27112
LUSC
ICGC
SRVKLRPLP
DEG_APCC_DBOX_1
0.6389
p.P898H
DO42472
UCEC
ICGC
SRVKLRPLP
DEG_APCC_DBOX_1
0.3056
p.Y906C
SIDM00148
Breast Carcinoma
GDSC
SRVKLRPLP
DEG_APCC_DBOX_1
0.5278
p.Y906C
MCF7
breast
COSMIC
SRVKLRPLP
DEG_APCC_DBOX_1
0.5278
p.A894T
HEC-1
endometrium
COSMIC
SRVKLRPLP
DEG_APCC_DBOX_1
0.7139
p.Y892F
SIG-M5
haematopoietic_and_lymphoid_tissue
COSMIC
SRVKLRPLP
DEG_APCC_DBOX_1
0.7528
Drug responses associated with PTPRG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRVKLRPLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P23470
Receptor-type tyrosine-protein phosphatase gamma
DEG_APCC_DBOX_1
889:897
SRVKLRPLP
APC,CDC20,FZR1
0.7115
More...