DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SRVRLQTIE
Uniprot ID:
P28827
Source protein:
Receptor-type tyrosine-protein phosphatase mu
Source gene:
PTPRM
Class:
DEG_APCC_DBOX_1
Location:
938:946
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8357
ASA_SCORE:
58.9222
COIL:
0.4774
CONS_SCORE:
0.651
DSS_SCORE:
0.3564
HELIX:
0.0098
FCONS_SCORE:
0.9921
RIG_SCORE:
0.8012
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G943R
TCGA-43-A475
LUSC
TCGA
SRVRLQTIE
DEG_APCC_DBOX_1
0.7568
p.H950N
TCGA-AA-A00N
COAD
TCGA
SRVRLQTIE
DEG_APCC_DBOX_1
0.2222
p.D929N
TCGA-AA-A010
COAD
TCGA
SRVRLQTIE
DEG_APCC_DBOX_1
0.5278
p.D929A
TCGA-CV-6948
HNSC
TCGA
SRVRLQTIE
DEG_APCC_DBOX_1
0.5278
p.R937T
TCGA-EA-A43B
CESC
TCGA
SRVRLQTIE
DEG_APCC_DBOX_1
0.3056
p.K932N
TCGA-GM-A2DL
BRCA
TCGA
SRVRLQTIE
DEG_APCC_DBOX_1
0.1667
p.I934V
DO223732
CESC
ICGC
SRVRLQTIE
DEG_APCC_DBOX_1
0.2222
p.V932L
DO229019
LICA
ICGC
SRVRLQTIE
DEG_APCC_DBOX_1
0.1667
p.G945V
DO37896
SKCM
ICGC
SRVRLQTIE
DEG_APCC_DBOX_1
0.7532
p.S952F
DO47584
SKCM
ICGC
SRVRLQTIE
DEG_APCC_DBOX_1
0.1667
p.I932M
DO47761
STAD
ICGC
SRVRLQTIE
DEG_APCC_DBOX_1
0.1667
p.S951T
SIDM00551
Esophageal Squamous Cell Carcinoma
GDSC
SRVRLQTIE
DEG_APCC_DBOX_1
0.1944
p.S951T
KYSE-220
oesophagus
COSMIC
SRVRLQTIE
DEG_APCC_DBOX_1
0.1944
p.I945V
ACH-000930
Breast Cancer
CCLE
SRVRLQTIE
DEG_APCC_DBOX_1
0.5965
p.I945V
HCC1569
breast
COSMIC
SRVRLQTIE
DEG_APCC_DBOX_1
0.5965
p.S938T
ACH-002263
Esophageal Cancer
CCLE
SRVRLQTIE
DEG_APCC_DBOX_1
0.6005
p.S938T
KYSE-220
oesophagus
COSMIC
SRVRLQTIE
DEG_APCC_DBOX_1
0.6005
p.T954A
GP5d
large_intestine
COSMIC
SRVRLQTIE
DEG_APCC_DBOX_1
0.1111
p.Y949C
EN
endometrium
COSMIC
SRVRLQTIE
DEG_APCC_DBOX_1
0.25
Drug responses associated with PTPRM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRVRLQTIE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28827
Receptor-type tyrosine-protein phosphatase mu
DEG_APCC_DBOX_1
938:946
SRVRLQTIE
APC,CDC20,FZR1
0.8357
More...