DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
SRVSLTDIP
Uniprot ID:
Q15772
Source protein:
Striated muscle preferentially expressed protein kinase
Source gene:
SPEG
Class:
DEG_APCC_DBOX_1
Location:
1946:1954
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9846
ASA_SCORE:
76.7778
COIL:
0.781
CONS_SCORE:
0.8483
DSS_SCORE:
0.6916
HELIX:
0.1016
FCONS_SCORE:
1.2259
RIG_SCORE:
0.6741
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1947G
TCGA-17-Z031
LUAD
TCGA
SRVSLTDIP
DEG_APCC_DBOX_1
0.7568
p.A1959V
TCGA-AP-A1DV
UCEC
TCGA
SRVSLTDIP
DEG_APCC_DBOX_1
0.1944
p.A1959V
DO43186
UCEC
ICGC
SRVSLTDIP
DEG_APCC_DBOX_1
0.1944
p.E1956D
TCGA-BQ-7053
KIRP
TCGA
SRVSLTDIP
DEG_APCC_DBOX_1
0.2778
p.E1956D
DO20946
KIRP
ICGC
SRVSLTDIP
DEG_APCC_DBOX_1
0.2778
p.R1937S
TCGA-D9-A148
SKCM
TCGA
SRVSLTDIP
DEG_APCC_DBOX_1
0.0833
p.R1937S
DO37971
SKCM
ICGC
SRVSLTDIP
DEG_APCC_DBOX_1
0.0833
p.P1936L
TCGA-DT-5265
READ
TCGA
SRVSLTDIP
DEG_APCC_DBOX_1
0.0556
p.P1936L
DO36499
READ
ICGC
SRVSLTDIP
DEG_APCC_DBOX_1
0.0556
p.R1937H
TCGA-EY-A1GI
UCEC
TCGA
SRVSLTDIP
DEG_APCC_DBOX_1
0.0833
p.R1937H
DO41211
UCEC
ICGC
SRVSLTDIP
DEG_APCC_DBOX_1
0.0833
p.R1937H
SIDM00238
Ovarian Carcinoma
GDSC
SRVSLTDIP
DEG_APCC_DBOX_1
0.0833
p.R1937H
ACH-000947
Ovarian Cancer
CCLE
SRVSLTDIP
DEG_APCC_DBOX_1
0.0833
p.R1937H
OVK-18
ovary
COSMIC
SRVSLTDIP
DEG_APCC_DBOX_1
0.0833
p.P1936R
DO225319
BRCA
ICGC
SRVSLTDIP
DEG_APCC_DBOX_1
0.0556
p.T1962S
DO222755
COCA
ICGC
SRVSLTDIP
DEG_APCC_DBOX_1
0.1111
p.G1961E
DO220898
MELA
ICGC
SRVSLTDIP
DEG_APCC_DBOX_1
0.1389
p.T1955N
SIDM00789
Colorectal Carcinoma
GDSC
SRVSLTDIP
DEG_APCC_DBOX_1
0.3056
p.T1955N
ACH-000997
Colon/Colorectal Cancer
CCLE
SRVSLTDIP
DEG_APCC_DBOX_1
0.3056
p.T1955N
ACH-001061
Colon/Colorectal Cancer
CCLE
SRVSLTDIP
DEG_APCC_DBOX_1
0.3056
p.T1955N
ACH-001091
Colon/Colorectal Cancer
CCLE
SRVSLTDIP
DEG_APCC_DBOX_1
0.3056
p.T1955N
HCT-15
large_intestine
COSMIC
SRVSLTDIP
DEG_APCC_DBOX_1
0.3056
p.D1957E
SIDM00320
Non-Small Cell Lung Carcinoma
GDSC
SRVSLTDIP
DEG_APCC_DBOX_1
0.25
p.D1957E
ACH-001233
Lung Cancer
CCLE
SRVSLTDIP
DEG_APCC_DBOX_1
0.25
p.D1957E
VMRC-LCD
lung
COSMIC
SRVSLTDIP
DEG_APCC_DBOX_1
0.25
Drug responses associated with SPEG mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SRVSLTDIP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15772
Striated muscle preferentially expressed protein kinase
DEG_APCC_DBOX_1
1946:1954
SRVSLTDIP
APC,CDC20,FZR1
0.9846
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