DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SSAEPEKVPSY
Uniprot ID:
Q8NEL0
Source protein:
Coiled-coil domain-containing protein 54
Source gene:
CCDC54
Class:
DEG_COP1_1
Location:
191:201
E3 ligase:
COP1
DEGRON score:
0.986
ASA_SCORE:
79.2455
COIL:
0.8372
CONS_SCORE:
0.6407
DSS_SCORE:
0.5906
HELIX:
0.0637
FCONS_SCORE:
1.4104
RIG_SCORE:
0.6409
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S204Y
TCGA-06-5416
GBM
TCGA
SSAEPEKVPSY
DEG_COP1_1
0.25
p.S204Y
DO10880
GBM
ICGC
SSAEPEKVPSY
DEG_COP1_1
0.25
p.S204Y
SIDM00511
Small Cell Lung Carcinoma
GDSC
SSAEPEKVPSY
DEG_COP1_1
0.25
p.S204Y
ACH-000257
Lung Cancer
CCLE
SSAEPEKVPSY
DEG_COP1_1
0.25
p.S204Y
COR-L279
lung
COSMIC
SSAEPEKVPSY
DEG_COP1_1
0.25
p.T205I
TCGA-2G-AAGM
TGCT
TCGA
SSAEPEKVPSY
DEG_COP1_1
0.2222
p.D206A
TCGA-2Y-A9GW
LIHC
TCGA
SSAEPEKVPSY
DEG_COP1_1
0.1944
p.D206A
DO219511
LIHC
ICGC
SSAEPEKVPSY
DEG_COP1_1
0.1944
p.D206A
SIDM00422
Hodgkin's Lymphoma
GDSC
SSAEPEKVPSY
DEG_COP1_1
0.1944
p.D206A
ACH-001203
Lymphoma
CCLE
SSAEPEKVPSY
DEG_COP1_1
0.1944
p.D206A
SUP-HD1
haematopoietic_and_lymphoid_tissue
COSMIC
SSAEPEKVPSY
DEG_COP1_1
0.1944
p.P202T
TCGA-CK-5916
COAD
TCGA
SSAEPEKVPSY
DEG_COP1_1
0.3056
p.P202T
DO8786
COAD
ICGC
SSAEPEKVPSY
DEG_COP1_1
0.3056
p.L208F
TCGA-D3-A8GB
SKCM
TCGA
SSAEPEKVPSY
DEG_COP1_1
0.1389
p.L208F
DO50280
SKCM
ICGC
SSAEPEKVPSY
DEG_COP1_1
0.1389
p.S192L
TCGA-GU-AATP
BLCA
TCGA
SSAEPEKVPSY
DEG_COP1_1
0.7667
p.S192L
DO51894
BLCA
ICGC
SSAEPEKVPSY
DEG_COP1_1
0.7667
p.S185A
TCGA-K4-A6FZ
BLCA
TCGA
SSAEPEKVPSY
DEG_COP1_1
0.1667
p.S185A
DO44045
BLCA
ICGC
SSAEPEKVPSY
DEG_COP1_1
0.1667
p.T182A
TCGA-VQ-A8P2
STAD
TCGA
SSAEPEKVPSY
DEG_COP1_1
0.5278
p.T182A
DO51761
STAD
ICGC
SSAEPEKVPSY
DEG_COP1_1
0.5278
p.P202S
DO222595
MELA
ICGC
SSAEPEKVPSY
DEG_COP1_1
0.3056
p.P195T
SIDM02033
Colorectal Carcinoma
GDSC
SSAEPEKVPSY
DEG_COP1_1
0.5919
p.P199L
SIDM01039
Other Solid Cancers
GDSC
SSAEPEKVPSY
DEG_COP1_1
0.7582
p.E209D
SIDM01100
Neuroblastoma
GDSC
SSAEPEKVPSY
DEG_COP1_1
0.1111
p.E209D
ACH-000366
Neuroblastoma
CCLE
SSAEPEKVPSY
DEG_COP1_1
0.1111
p.E209D
SK-N-DZ
autonomic_ganglia
COSMIC
SSAEPEKVPSY
DEG_COP1_1
0.1111
Drug responses associated with CCDC54 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSAEPEKVPSY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NEL0
Coiled-coil domain-containing protein 54
DEG_COP1_1
191:201
SSAEPEKVPSY
COP1
0.986
More...