DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SSEETYQVPTL
Uniprot ID:
Q9NQ75
Source protein:
Cas scaffolding protein family member 4
Source gene:
CASS4
Class:
DEG_COP1_1
Location:
93:103
E3 ligase:
COP1
DEGRON score:
0.9995
ASA_SCORE:
87.1455
COIL:
0.8357
CONS_SCORE:
0.4687
DSS_SCORE:
0.6631
HELIX:
0.1327
FCONS_SCORE:
1.4574
RIG_SCORE:
0.6624
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y98C
TCGA-BW-A5NO
LIHC
TCGA
SSEETYQVPTL
DEG_COP1_1
0.7087
p.Y98C
DO52171
LIHC
ICGC
SSEETYQVPTL
DEG_COP1_1
0.7087
p.L103P
DO218012
ORCA
ICGC
SSEETYQVPTL
DEG_COP1_1
0.6471
p.E95G
TCGA-A5-A0G3
UCEC
TCGA
SSEETYQVPTL
DEG_COP1_1
0.6087
p.E95G
DO44003
UCEC
ICGC
SSEETYQVPTL
DEG_COP1_1
0.6087
p.E96D
TCGA-DF-A2KU
UCEC
TCGA
SSEETYQVPTL
DEG_COP1_1
0.5647
p.E96D
DO223286
UCEC
ICGC
SSEETYQVPTL
DEG_COP1_1
0.5647
p.E95Q
TCGA-F7-8298
HNSC
TCGA
SSEETYQVPTL
DEG_COP1_1
0.5633
p.E95Q
DO14958
HNSC
ICGC
SSEETYQVPTL
DEG_COP1_1
0.5633
p.R105C
TCGA-B5-A0K6
UCEC
TCGA
SSEETYQVPTL
DEG_COP1_1
0.2778
p.R105C
DO40808
UCEC
ICGC
SSEETYQVPTL
DEG_COP1_1
0.2778
p.R105H
DO223024
ESCA
ICGC
SSEETYQVPTL
DEG_COP1_1
0.2778
p.R105H
SIDM00217
Colorectal Carcinoma
GDSC
SSEETYQVPTL
DEG_COP1_1
0.2778
p.R105H
SIDM00839
Colorectal Carcinoma
GDSC
SSEETYQVPTL
DEG_COP1_1
0.2778
p.R105H
ACH-000950
Colon/Colorectal Cancer
CCLE
SSEETYQVPTL
DEG_COP1_1
0.2778
p.R105H
ACH-000999
Colon/Colorectal Cancer
CCLE
SSEETYQVPTL
DEG_COP1_1
0.2778
p.R105H
SNU-1040
large_intestine
COSMIC
SSEETYQVPTL
DEG_COP1_1
0.2778
p.R105H
LoVo
large_intestine
COSMIC
SSEETYQVPTL
DEG_COP1_1
0.2778
p.P91L
SIDM00837
Colorectal Carcinoma
GDSC
SSEETYQVPTL
DEG_COP1_1
0.2778
p.P91L
ACH-000958
Colon/Colorectal Cancer
CCLE
SSEETYQVPTL
DEG_COP1_1
0.2778
p.P91L
SW48
large_intestine
COSMIC
SSEETYQVPTL
DEG_COP1_1
0.2778
p.P106H
TCGA-AA-3811
COAD
TCGA
SSEETYQVPTL
DEG_COP1_1
0.25
p.P106H
DO7962
COAD
ICGC
SSEETYQVPTL
DEG_COP1_1
0.25
p.P107H
TCGA-NJ-A4YQ
LUAD
TCGA
SSEETYQVPTL
DEG_COP1_1
0.2222
p.P107H
DO218944
LUAD
ICGC
SSEETYQVPTL
DEG_COP1_1
0.2222
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Drug responses associated with CASS4 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of SSEETYQVPTL
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NQ75
Cas scaffolding protein family member 4
DEG_COP1_1
93:103
SSEETYQVPTL
COP1
0.9995
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