DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SSGIDVPEI
Uniprot ID:
Q9NQ86
Source protein:
E3 ubiquitin-protein ligase TRIM36
Source gene:
TRIM36
Class:
DEG_COP1_1
Location:
414:422
E3 ligase:
COP1
DEGRON score:
0.9448
ASA_SCORE:
62.0444
COIL:
0.7447
CONS_SCORE:
0.3126
DSS_SCORE:
0.291
HELIX:
0.0526
FCONS_SCORE:
0.7831
RIG_SCORE:
0.7717
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V429I
TCGA-09-2049
OV
TCGA
SSGIDVPEI
DEG_COP1_1
0.1389
p.V429F
TCGA-39-5029
LUSC
TCGA
SSGIDVPEI
DEG_COP1_1
0.1389
p.Q426H
TCGA-A5-A0G2
UCEC
TCGA
SSGIDVPEI
DEG_COP1_1
0.2222
p.V419A
TCGA-BQ-5885
KIRP
TCGA
SSGIDVPEI
DEG_COP1_1
0.6936
p.E421D
TCGA-E6-A1LX
UCEC
TCGA
SSGIDVPEI
DEG_COP1_1
0.5647
p.S411F
TCGA-FS-A1Z3
SKCM
TCGA
SSGIDVPEI
DEG_COP1_1
0.25
p.T404A
TCGA-KU-A6H7
HNSC
TCGA
SSGIDVPEI
DEG_COP1_1
0.0556
p.R424P
DO7828
COAD
ICGC
SSGIDVPEI
DEG_COP1_1
0.2778
p.I414T
DO13863
GBM
ICGC
SSGIDVPEI
DEG_COP1_1
0.7078
p.P427Q
DO229026
LICA
ICGC
SSGIDVPEI
DEG_COP1_1
0.1944
p.H419N
DO229006
LICA
ICGC
SSGIDVPEI
DEG_COP1_1
0.7423
p.D406N
DO26384
LUAD
ICGC
SSGIDVPEI
DEG_COP1_1
0.1111
p.F420V
DO23627
LUAD
ICGC
SSGIDVPEI
DEG_COP1_1
0.7068
p.I409T
DO228865
MALY
ICGC
SSGIDVPEI
DEG_COP1_1
0.1944
p.R424C
DO220239
SARC
ICGC
SSGIDVPEI
DEG_COP1_1
0.2778
p.R424C
DO37444
SKCM
ICGC
SSGIDVPEI
DEG_COP1_1
0.2778
p.E426K
DO47453
SKCM
ICGC
SSGIDVPEI
DEG_COP1_1
0.2222
p.F420Y
DO219468
SKCM
ICGC
SSGIDVPEI
DEG_COP1_1
0.7528
p.D411Y
DO41572
UCEC
ICGC
SSGIDVPEI
DEG_COP1_1
0.25
p.V419M
SIDM00406
B-Cell Non-Hodgkin's Lymphoma
GDSC
SSGIDVPEI
DEG_COP1_1
0.7208
p.V419M
SIDM00519
Mesothelioma
GDSC
SSGIDVPEI
DEG_COP1_1
0.7208
p.V419M
SIDM01591
Breast Carcinoma
GDSC
SSGIDVPEI
DEG_COP1_1
0.7208
p.V419M
SIDM01590
Breast Carcinoma
GDSC
SSGIDVPEI
DEG_COP1_1
0.7208
p.E405D
SIDM01567
Hodgkin's Lymphoma
GDSC
SSGIDVPEI
DEG_COP1_1
0.0833
p.E405D
ACH-000069
Lymphoma
CCLE
SSGIDVPEI
DEG_COP1_1
0.0833
p.I409N
SLVL
haematopoietic_and_lymphoid_tissue
COSMIC
SSGIDVPEI
DEG_COP1_1
0.1944
p.W425L
HC-1
haematopoietic_and_lymphoid_tissue
COSMIC
SSGIDVPEI
DEG_COP1_1
0.25
p.K430T
MS751
cervix
COSMIC
SSGIDVPEI
DEG_COP1_1
0.1111
p.W421L
TYK-nu
ovary
COSMIC
SSGIDVPEI
DEG_COP1_1
0.7015
Drug responses associated with TRIM36 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSGIDVPEI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NQ86
E3 ubiquitin-protein ligase TRIM36
DEG_COP1_1
414:422
SSGIDVPEI
COP1
0.9448
More...