DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
SSGLDREKVPEY
Uniprot ID:
P22223
Source protein:
Cadherin-3
Source gene:
CDH3
Class:
DEG_COP1_1
Location:
283:294
E3 ligase:
COP1
DEGRON score:
0.628
ASA_SCORE:
64.625
COIL:
0.6597
CONS_SCORE:
0.5349
DSS_SCORE:
0.3971
HELIX:
0.0833
FCONS_SCORE:
1.0468
RIG_SCORE:
0.7755
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E289G
TCGA-B5-A1MX
UCEC
TCGA
SSGLDREKVPEY
DEG_COP1_1
0.6087
p.E289G
DO41999
UCEC
ICGC
SSGLDREKVPEY
DEG_COP1_1
0.6087
p.R274W
TCGA-BR-A4QL
STAD
TCGA
SSGLDREKVPEY
DEG_COP1_1
0.0833
p.R274W
DO38723
STAD
ICGC
SSGLDREKVPEY
DEG_COP1_1
0.0833
p.R274W
SIDM00952
B-Cell Non-Hodgkin's Lymphoma
GDSC
SSGLDREKVPEY
DEG_COP1_1
0.0833
p.R274W
SIDM00483
Esophageal Carcinoma
GDSC
SSGLDREKVPEY
DEG_COP1_1
0.0833
p.R274W
ACH-001654
Esophageal Cancer
CCLE
SSGLDREKVPEY
DEG_COP1_1
0.0833
p.R274W
ACH-002220
Lymphoma
CCLE
SSGLDREKVPEY
DEG_COP1_1
0.0833
p.R274W
SK-GT-4
oesophagus
COSMIC
SSGLDREKVPEY
DEG_COP1_1
0.0833
p.R274W
CRO-AP2
haematopoietic_and_lymphoid_tissue
COSMIC
SSGLDREKVPEY
DEG_COP1_1
0.0833
p.R288W
TCGA-NK-A5D1
LUSC
TCGA
SSGLDREKVPEY
DEG_COP1_1
0.7523
p.R288W
DO219213
LUSC
ICGC
SSGLDREKVPEY
DEG_COP1_1
0.7523
p.R288W
SIDM00837
Colorectal Carcinoma
GDSC
SSGLDREKVPEY
DEG_COP1_1
0.7523
p.R288W
ACH-000958
Colon/Colorectal Cancer
CCLE
SSGLDREKVPEY
DEG_COP1_1
0.7523
p.M303I
SIDM00917
Acute Myeloid Leukemia
GDSC
SSGLDREKVPEY
DEG_COP1_1
0.0833
p.M303I
SIDM00261
Ewing's Sarcoma
GDSC
SSGLDREKVPEY
DEG_COP1_1
0.0833
p.L296M
SIDM00796
Head and Neck Carcinoma
GDSC
SSGLDREKVPEY
DEG_COP1_1
0.2778
p.L296M
ACH-000740
Head and Neck Cancer
CCLE
SSGLDREKVPEY
DEG_COP1_1
0.2778
p.L296M
A253
salivary_gland
COSMIC
SSGLDREKVPEY
DEG_COP1_1
0.2778
p.T297S
ACH-001628
Ovarian Cancer
CCLE
SSGLDREKVPEY
DEG_COP1_1
0.25
Drug responses associated with CDH3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSGLDREKVPEY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P22223
Cadherin-3
DEG_COP1_1
283:294
SSGLDREKVPEY
COP1
0.628
More...