DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SSGRVPTI
Uniprot ID:
Q9UPQ3
Source protein:
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1
Source gene:
AGAP1
Class:
DEG_COP1_1
Location:
849:856
E3 ligase:
COP1
DEGRON score:
0.6448
ASA_SCORE:
85.1375
COIL:
0.9015
CONS_SCORE:
0.2825
DSS_SCORE:
0.7712
HELIX:
0.0391
FCONS_SCORE:
0.8944
RIG_SCORE:
0.6899
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R846Q
TCGA-BR-8487
STAD
TCGA
SSGRVPTI
DEG_COP1_1
0.25
p.R846Q
TCGA-EE-A2GO
SKCM
TCGA
SSGRVPTI
DEG_COP1_1
0.25
p.R846Q
DO50970
LICA
ICGC
SSGRVPTI
DEG_COP1_1
0.25
p.R846Q
DO37823
SKCM
ICGC
SSGRVPTI
DEG_COP1_1
0.25
p.R846Q
DO47867
STAD
ICGC
SSGRVPTI
DEG_COP1_1
0.25
p.N845D
TCGA-DD-A4NN
LIHC
TCGA
SSGRVPTI
DEG_COP1_1
0.2222
p.N845D
DO44970
LIHC
ICGC
SSGRVPTI
DEG_COP1_1
0.2222
p.N848S
TCGA-RC-A6M6
LIHC
TCGA
SSGRVPTI
DEG_COP1_1
0.3056
p.N848S
DO223917
LIHC
ICGC
SSGRVPTI
DEG_COP1_1
0.3056
p.G851W
SIDM00119
Non-Small Cell Lung Carcinoma
GDSC
SSGRVPTI
DEG_COP1_1
0.6714
p.G851W
EKVX
lung
COSMIC
SSGRVPTI
DEG_COP1_1
0.6714
p.P854T
SIDM00115
Head and Neck Carcinoma
GDSC
SSGRVPTI
DEG_COP1_1
0.7031
p.P854T
PCI-6A
upper_aerodigestive_tract
COSMIC
SSGRVPTI
DEG_COP1_1
0.7031
Drug responses associated with AGAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSGRVPTI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPQ3
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1
DEG_COP1_1
849:856
SSGRVPTI
COP1
0.6448
More...