DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
SSHSSKVPEA
Uniprot ID:
P78559
Source protein:
Microtubule-associated protein 1A
Source gene:
MAP1A
Class:
DEG_COP1_1
Location:
1928:1937
E3 ligase:
COP1
DEGRON score:
0.8441
ASA_SCORE:
97.63
COIL:
0.9373
CONS_SCORE:
0.5301
DSS_SCORE:
0.7791
HELIX:
0.035
FCONS_SCORE:
1.0511
RIG_SCORE:
0.4945
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1942V
TCGA-AA-A010
COAD
TCGA
SSHSSKVPEA
DEG_COP1_1
0.1944
p.S1940N
TCGA-FW-A3R5
SKCM
TCGA
SSHSSKVPEA
DEG_COP1_1
0.25
p.S1940N
DO37406
SKCM
ICGC
SSHSSKVPEA
DEG_COP1_1
0.25
p.R1921K
TCGA-T3-A92M
HNSC
TCGA
SSHSSKVPEA
DEG_COP1_1
0.1389
p.R1921K
DO223269
HNSC
ICGC
SSHSSKVPEA
DEG_COP1_1
0.1389
p.T1944K
TCGA-VR-A8EX
ESCA
TCGA
SSHSSKVPEA
DEG_COP1_1
0.1389
p.K1927E
DO230334
COCA
ICGC
SSHSSKVPEA
DEG_COP1_1
0.3056
p.E1945D
DO229028
LICA
ICGC
SSHSSKVPEA
DEG_COP1_1
0.1111
p.P1925H
DO228253
MALY
ICGC
SSHSSKVPEA
DEG_COP1_1
0.25
p.R1942W
ACH-000895
Colon/Colorectal Cancer
CCLE
SSHSSKVPEA
DEG_COP1_1
0.1944
p.R1942W
CL-34
large_intestine
COSMIC
SSHSSKVPEA
DEG_COP1_1
0.1944
p.E1937K
ACH-000968
Skin Cancer
CCLE
SSHSSKVPEA
DEG_COP1_1
0.7022
p.E1937K
COLO-792
skin
COSMIC
SSHSSKVPEA
DEG_COP1_1
0.7022
p.R1924I
ACH-002272
Lymphoma
CCLE
SSHSSKVPEA
DEG_COP1_1
0.2222
p.R1924I
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
SSHSSKVPEA
DEG_COP1_1
0.2222
Drug responses associated with MAP1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSHSSKVPEA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P78559
Microtubule-associated protein 1A
DEG_COP1_1
1928:1937
SSHSSKVPEA
COP1
0.8441
More...