DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SSISVPTA
Uniprot ID:
P51610
Source protein:
Host cell factor 1
Source gene:
HCFC1
Class:
DEG_COP1_1
Location:
470:477
E3 ligase:
COP1
DEGRON score:
0.9765
ASA_SCORE:
85.3375
COIL:
0.8956
CONS_SCORE:
0.4389
DSS_SCORE:
0.4346
HELIX:
0.022
FCONS_SCORE:
0.9822
RIG_SCORE:
0.7118
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R479S
TCGA-55-7576
LUAD
TCGA
SSISVPTA
DEG_COP1_1
0.2778
p.R479S
DO24431
LUAD
ICGC
SSISVPTA
DEG_COP1_1
0.2778
p.T476A
TCGA-BG-A222
UCEC
TCGA
SSISVPTA
DEG_COP1_1
0.7139
p.T476A
DO42977
UCEC
ICGC
SSISVPTA
DEG_COP1_1
0.7139
p.S473F
TCGA-D9-A6EC
SKCM
TCGA
SSISVPTA
DEG_COP1_1
0.6871
p.S473F
DO50291
SKCM
ICGC
SSISVPTA
DEG_COP1_1
0.6871
p.A477T
TCGA-DF-A2KV
UCEC
TCGA
SSISVPTA
DEG_COP1_1
0.7139
p.A477T
DO219771
UCEC
ICGC
SSISVPTA
DEG_COP1_1
0.7139
p.A478D
DO229037
LICA
ICGC
SSISVPTA
DEG_COP1_1
0.3056
p.T460A
DO231051
LUSC
ICGC
SSISVPTA
DEG_COP1_1
0.0556
p.P475S
DO229221
THCA
ICGC
SSISVPTA
DEG_COP1_1
0.6752
Drug responses associated with HCFC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSISVPTA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P51610
Host cell factor 1
DEG_COP1_1
470:477
SSISVPTA
COP1
0.9765
More...