DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
SSPVYVPTP
Uniprot ID:
P43694
Source protein:
Transcription factor GATA-4
Source gene:
GATA4
Class:
DEG_COP1_1
Location:
34:42
E3 ligase:
COP1
DEGRON score:
0.9945
ASA_SCORE:
63.1889
COIL:
0.8564
CONS_SCORE:
0.3586
DSS_SCORE:
0.369
HELIX:
0.0102
FCONS_SCORE:
1.0813
RIG_SCORE:
0.7289
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M27V
DO32851
PACA
ICGC
SSPVYVPTP
DEG_COP1_1
0.1389
p.A25V
SIDM01259
B-Lymphoblastic Leukemia
GDSC
SSPVYVPTP
DEG_COP1_1
0.0833
p.A25V
ACH-001669
Leukemia
CCLE
SSPVYVPTP
DEG_COP1_1
0.0833
p.G36C
NCI-H1944
lung
COSMIC
SSPVYVPTP
DEG_COP1_1
0.76
p.G36S
22RV1
prostate
COSMIC
SSPVYVPTP
DEG_COP1_1
0.6993
Drug responses associated with GATA4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSPVYVPTP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P43694
Transcription factor GATA-4
DEG_COP1_1
34:42
SSPVYVPTP
COP1
0.9945
More...