DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SSRSQTVPSP
Uniprot ID:
Q9P2D1
Source protein:
Chromodomain-helicase-DNA-binding protein 7
Source gene:
CHD7
Class:
DEG_COP1_1
Location:
293:302
E3 ligase:
COP1
DEGRON score:
0.8725
ASA_SCORE:
89.51
COIL:
0.9591
CONS_SCORE:
0.3058
DSS_SCORE:
0.6401
HELIX:
0.0192
FCONS_SCORE:
0.9831
RIG_SCORE:
0.647
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S294Y
TCGA-AP-A1DV
UCEC
TCGA
SSRSQTVPSP
DEG_COP1_1
0.6009
p.S294Y
DO43186
UCEC
ICGC
SSRSQTVPSP
DEG_COP1_1
0.6009
p.A284T
TCGA-D1-A1NZ
UCEC
TCGA
SSRSQTVPSP
DEG_COP1_1
0.0833
p.A284T
DO41536
UCEC
ICGC
SSRSQTVPSP
DEG_COP1_1
0.0833
p.P287L
TCGA-HU-A4GN
STAD
TCGA
SSRSQTVPSP
DEG_COP1_1
0.1667
p.P287L
DO233281
GACA
ICGC
SSRSQTVPSP
DEG_COP1_1
0.1667
p.P287L
DO47833
STAD
ICGC
SSRSQTVPSP
DEG_COP1_1
0.1667
p.L290F
DO222743
MELA
ICGC
SSRSQTVPSP
DEG_COP1_1
0.25
p.T289I
DO222875
MELA
ICGC
SSRSQTVPSP
DEG_COP1_1
0.2222
p.R286G
SIDM01265
Plasma Cell Myeloma
GDSC
SSRSQTVPSP
DEG_COP1_1
0.1389
p.R286G
SIDM00930
Osteosarcoma
GDSC
SSRSQTVPSP
DEG_COP1_1
0.1389
p.R286G
SIDM00956
Esophageal Squamous Cell Carcinoma
GDSC
SSRSQTVPSP
DEG_COP1_1
0.1389
p.S296N
SIDM00845
Burkitt's Lymphoma
GDSC
SSRSQTVPSP
DEG_COP1_1
0.818
p.S296N
SIDM01519
Head and Neck Carcinoma
GDSC
SSRSQTVPSP
DEG_COP1_1
0.818
p.S296N
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
SSRSQTVPSP
DEG_COP1_1
0.818
p.I304V
SIDM00845
Burkitt's Lymphoma
GDSC
SSRSQTVPSP
DEG_COP1_1
0.2778
p.I304V
SIDM00946
T-Lymphoblastic Leukemia
GDSC
SSRSQTVPSP
DEG_COP1_1
0.2778
p.I304V
SIDM01519
Head and Neck Carcinoma
GDSC
SSRSQTVPSP
DEG_COP1_1
0.2778
p.I304V
ACH-000786
Lymphoma
CCLE
SSRSQTVPSP
DEG_COP1_1
0.2778
p.I304V
ACH-000992
Head and Neck Cancer
CCLE
SSRSQTVPSP
DEG_COP1_1
0.2778
p.I304V
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
SSRSQTVPSP
DEG_COP1_1
0.2778
p.R295Q
SIDM00839
Colorectal Carcinoma
GDSC
SSRSQTVPSP
DEG_COP1_1
0.6218
p.R295Q
LoVo
large_intestine
COSMIC
SSRSQTVPSP
DEG_COP1_1
0.6218
Drug responses associated with CHD7 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSRSQTVPSP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9P2D1
Chromodomain-helicase-DNA-binding protein 7
DEG_COP1_1
293:302
SSRSQTVPSP
COP1
0.8725
More...