DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SSRSTVPTP
Uniprot ID:
Q7Z628
Source protein:
Neuroepithelial cell-transforming gene 1 protein
Source gene:
NET1
Class:
DEG_COP1_1
Location:
139:147
E3 ligase:
COP1
DEGRON score:
0.9809
ASA_SCORE:
89.3
COIL:
0.9137
CONS_SCORE:
0.5485
DSS_SCORE:
0.5927
HELIX:
0.051
FCONS_SCORE:
1.1207
RIG_SCORE:
0.6463
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R130T
TCGA-18-3410
LUSC
TCGA
SSRSTVPTP
DEG_COP1_1
0.0833
p.R130T
DO26456
LUSC
ICGC
SSRSTVPTP
DEG_COP1_1
0.0833
p.A135T
TCGA-BT-A42F
BLCA
TCGA
SSRSTVPTP
DEG_COP1_1
0.2222
p.A135T
DO49726
BLCA
ICGC
SSRSTVPTP
DEG_COP1_1
0.2222
p.S131F
TCGA-FS-A1ZD
SKCM
TCGA
SSRSTVPTP
DEG_COP1_1
0.1111
p.S131F
DO37627
SKCM
ICGC
SSRSTVPTP
DEG_COP1_1
0.1111
p.A148T
DO230309
COCA
ICGC
SSRSTVPTP
DEG_COP1_1
0.3056
p.A133S
DO233896
GACA
ICGC
SSRSTVPTP
DEG_COP1_1
0.1667
p.Q136H
DO229026
LICA
ICGC
SSRSTVPTP
DEG_COP1_1
0.25
p.W156C
DO229026
LICA
ICGC
SSRSTVPTP
DEG_COP1_1
0.0833
p.R130I
DO229009
LICA
ICGC
SSRSTVPTP
DEG_COP1_1
0.0833
p.K137R
SIDM00498
Colorectal Carcinoma
GDSC
SSRSTVPTP
DEG_COP1_1
0.7222
p.K137R
SNU-C5
large_intestine
COSMIC
SSRSTVPTP
DEG_COP1_1
0.7222
p.S153G
SIDM01454
Kidney Carcinoma
GDSC
SSRSTVPTP
DEG_COP1_1
0.1667
p.D148N
ACH-000374
Breast Cancer
CCLE
SSRSTVPTP
DEG_COP1_1
0.3056
p.D148N
HCC1143
breast
COSMIC
SSRSTVPTP
DEG_COP1_1
0.3056
p.G131C
ACH-000961
Endometrial/Uterine Cancer
CCLE
SSRSTVPTP
DEG_COP1_1
0.1111
Drug responses associated with NET1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSRSTVPTP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z628
Neuroepithelial cell-transforming gene 1 protein
DEG_COP1_1
139:147
SSRSTVPTP
COP1
0.9809
More...