DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SSSGVPEA
Uniprot ID:
Q8IYX3
Source protein:
Coiled-coil domain-containing protein 116
Source gene:
CCDC116
Class:
DEG_COP1_1
Location:
248:255
E3 ligase:
COP1
DEGRON score:
0.8294
ASA_SCORE:
66.5625
COIL:
0.8188
CONS_SCORE:
0.6676
DSS_SCORE:
0.5825
HELIX:
0.0946
FCONS_SCORE:
0.805
RIG_SCORE:
0.5764
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P258L
TCGA-86-A4JF
LUAD
TCGA
SSSGVPEA
DEG_COP1_1
0.25
p.P258L
DO45317
LUAD
ICGC
SSSGVPEA
DEG_COP1_1
0.25
p.S243A
TCGA-XK-AAIV
PRAD
TCGA
SSSGVPEA
DEG_COP1_1
0.1944
p.S243A
DO51405
PRAD
ICGC
SSSGVPEA
DEG_COP1_1
0.1944
p.E264K
DO228483
BRCA
ICGC
SSSGVPEA
DEG_COP1_1
0.0833
p.E264K
DO230659
LAML
ICGC
SSSGVPEA
DEG_COP1_1
0.0833
p.E264K
DO231140
LAML
ICGC
SSSGVPEA
DEG_COP1_1
0.0833
p.W241S
DO6504
CLLE
ICGC
SSSGVPEA
DEG_COP1_1
0.1389
p.V252M
DO50341
ESAD
ICGC
SSSGVPEA
DEG_COP1_1
0.7208
p.V252M
SIDM00926
Non-Small Cell Lung Carcinoma
GDSC
SSSGVPEA
DEG_COP1_1
0.7208
p.V252M
SIDM01090
Colorectal Carcinoma
GDSC
SSSGVPEA
DEG_COP1_1
0.7208
p.V252M
SIDM00969
Ovarian Carcinoma
GDSC
SSSGVPEA
DEG_COP1_1
0.7208
p.V252M
SIDM00633
Breast Carcinoma
GDSC
SSSGVPEA
DEG_COP1_1
0.7208
p.V252M
SIDM00650
Small Cell Lung Carcinoma
GDSC
SSSGVPEA
DEG_COP1_1
0.7208
p.V252M
SIDM00309
Mesothelioma
GDSC
SSSGVPEA
DEG_COP1_1
0.7208
p.V252M
SIDM01681
Non-Cancerous
GDSC
SSSGVPEA
DEG_COP1_1
0.7208
p.G251C
DO228986
LICA
ICGC
SSSGVPEA
DEG_COP1_1
0.6489
p.G247V
SIDM00694
Other Solid Cancers
GDSC
SSSGVPEA
DEG_COP1_1
0.3056
Drug responses associated with CCDC116 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSSGVPEA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IYX3
Coiled-coil domain-containing protein 116
DEG_COP1_1
248:255
SSSGVPEA
COP1
0.8294
More...