DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SSSLWGVPTV
Uniprot ID:
Q9UPQ9
Source protein:
Trinucleotide repeat-containing gene 6B protein
Source gene:
TNRC6B
Class:
DEG_COP1_1
Location:
1799:1808
E3 ligase:
COP1
DEGRON score:
0.9721
ASA_SCORE:
47.86
COIL:
0.8024
CONS_SCORE:
0.4365
DSS_SCORE:
0.4307
HELIX:
0.0917
FCONS_SCORE:
1.0226
RIG_SCORE:
0.6946
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1790T
TCGA-A5-A1OF
UCEC
TCGA
SSSLWGVPTV
DEG_COP1_1
0.0833
p.A1790T
DO42568
UCEC
ICGC
SSSLWGVPTV
DEG_COP1_1
0.0833
p.P1795S
TCGA-AX-A2HA
UCEC
TCGA
SSSLWGVPTV
DEG_COP1_1
0.2222
p.P1795S
DO42504
UCEC
ICGC
SSSLWGVPTV
DEG_COP1_1
0.2222
p.S1791L
DO228650
LICA
ICGC
SSSLWGVPTV
DEG_COP1_1
0.1111
p.T1807K
SIDM00924
Other Solid Cancers
GDSC
SSSLWGVPTV
DEG_COP1_1
0.7306
p.T1807K
ChaGo-K-1
lung
COSMIC
SSSLWGVPTV
DEG_COP1_1
0.7306
Drug responses associated with TNRC6B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSSLWGVPTV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPQ9
Trinucleotide repeat-containing gene 6B protein
DEG_COP1_1
1799:1808
SSSLWGVPTV
COP1
0.9721
More...