DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SSSSVPEA
Uniprot ID:
Q8IXM2
Source protein:
Chromatin complexes subunit BAP18
Source gene:
BAP18
Class:
DEG_COP1_1
Location:
119:126
E3 ligase:
COP1
DEGRON score:
0.938
ASA_SCORE:
84.6125
COIL:
0.9325
CONS_SCORE:
0.4287
DSS_SCORE:
0.7232
HELIX:
0.0295
FCONS_SCORE:
0.8825
RIG_SCORE:
0.5141
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A114V
TCGA-A5-A0G2
UCEC
TCGA
SSSSVPEA
DEG_COP1_1
0.1944
p.A114V
DO41235
UCEC
ICGC
SSSSVPEA
DEG_COP1_1
0.1944
p.S120R
TCGA-A5-A1OF
UCEC
TCGA
SSSSVPEA
DEG_COP1_1
0.7427
p.S120R
DO42568
UCEC
ICGC
SSSSVPEA
DEG_COP1_1
0.7427
p.S110L
DO223028
ESCA
ICGC
SSSSVPEA
DEG_COP1_1
0.5278
p.A115D
DO233865
GACA
ICGC
SSSSVPEA
DEG_COP1_1
0.2222
p.P116L
SIDM00846
Cervical Carcinoma
GDSC
SSSSVPEA
DEG_COP1_1
0.25
p.P112L
ACH-001547
Lung Cancer
CCLE
SSSSVPEA
DEG_COP1_1
0.1389
Drug responses associated with BAP18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SSSSVPEA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IXM2
Chromatin complexes subunit BAP18
DEG_COP1_1
119:126
SSSSVPEA
COP1
0.938
More...