DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
STPCVPDP
Uniprot ID:
O14645
Source protein:
Axonemal dynein light intermediate polypeptide 1
Source gene:
DNALI1
Class:
DEG_COP1_1
Location:
54:61
E3 ligase:
COP1
DEGRON score:
0.9444
ASA_SCORE:
84.9875
COIL:
0.9554
CONS_SCORE:
0.2743
DSS_SCORE:
0.705
HELIX:
0.0219
FCONS_SCORE:
0.5907
RIG_SCORE:
0.6459
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G64C
TCGA-AX-A1CE
UCEC
TCGA
STPCVPDP
DEG_COP1_1
0.25
p.G64C
DO42280
UCEC
ICGC
STPCVPDP
DEG_COP1_1
0.25
p.E44D
TCGA-AZ-4315
COAD
TCGA
STPCVPDP
DEG_COP1_1
0.0556
p.E44D
DO8842
COAD
ICGC
STPCVPDP
DEG_COP1_1
0.0556
p.V55A
TCGA-BR-6452
STAD
TCGA
STPCVPDP
DEG_COP1_1
0.6936
p.V55A
DO38404
STAD
ICGC
STPCVPDP
DEG_COP1_1
0.6936
p.K54Q
TCGA-EO-A22X
UCEC
TCGA
STPCVPDP
DEG_COP1_1
0.6944
p.K54Q
DO43907
UCEC
ICGC
STPCVPDP
DEG_COP1_1
0.6944
p.P67T
DO222492
COCA
ICGC
STPCVPDP
DEG_COP1_1
0.1667
p.S65L
DO220877
MELA
ICGC
STPCVPDP
DEG_COP1_1
0.2222
p.R51Q
SIDM00782
Colorectal Carcinoma
GDSC
STPCVPDP
DEG_COP1_1
0.3611
p.R51Q
ACH-000381
Colon/Colorectal Cancer
CCLE
STPCVPDP
DEG_COP1_1
0.3611
p.R51Q
T84
large_intestine
COSMIC
STPCVPDP
DEG_COP1_1
0.3611
p.G64D
SIDM00140
Melanoma
GDSC
STPCVPDP
DEG_COP1_1
0.25
p.G64D
ACH-000968
Skin Cancer
CCLE
STPCVPDP
DEG_COP1_1
0.25
p.G64D
COLO-792
skin
COSMIC
STPCVPDP
DEG_COP1_1
0.25
p.K71M
ACH-000490
Cervical Cancer
CCLE
STPCVPDP
DEG_COP1_1
0.0556
Drug responses associated with DNALI1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of STPCVPDP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14645
Axonemal dynein light intermediate polypeptide 1
DEG_COP1_1
54:61
STPCVPDP
COP1
0.9444
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